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SCNpilot_expt_1000_bf_scaffold_3100_curated_18

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 16844..17554

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator {ECO:0000313|EMBL:KJE35825.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 233.0
  • Bit_score: 231
  • Evalue 1.50e-57
LysR family transcriptional regulator n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LWM7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 233.0
  • Bit_score: 229
  • Evalue 4.00e-57
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 230.0
  • Bit_score: 218
  • Evalue 2.90e-54

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Taxonomy

Thalassospira sp. HJ → Thalassospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
TTGCTGTTCACCGCCGTCACCGATGTGCTGGGACGGCTGGCCGCGGCGGAGGAGGCGCTCAAGAATGTCCACGAATCCCCGCGCGGCGCGCTGAAGATCACCGCCAGTCACGGCATCGGCGCCTATTGGCTGTTGCCGCGGCTGGGCCACTTCCTGGCCCAGTATCCGGAAGTGGAAGTGCATCTGGTGCTGGACGACAAGGAACTGGACCTGGCGCAGCGCGAGGCCGATCTGGCCATCCGTATGCGCGCCCCGGTGCAGGCCGACCTGATCCAGCGCAAGCTGTTCACGGTCCACTACCATATGTACGCCTCCAAGGCGTATCTGAAGGAACACCCCGCGCCCCGGTCGCTGGACGAAATCGCCGATCACAGCATCATCGTCTATGGCGAAACAGCGGTGCCCGAGATTCGCGACATCAACTGGCTGCTGGAAGCCTATAAGAAAACCGCCAGGCCGGGCGGCAAAGGCAAGATCATCCGGATCAACAACATCACCGGCATCCTGCAGGCCACCGAGGCGGGCCTGGGCATCGGTGTGGTGCCCGACTATGTCGCCGCCGAGCATCCCAAGCTGGAGCGGGTGTTGCCCGAAGTGGCCGCCCCCGGTTTCGACGTGCATCTGGTCTATGCCGATGCGCTGCGCCAGTCCAAGCGCGTGGCGGCATTCCGCGACTTCGCGGTGAAATCCTCCAAGGACTGGCAGTACTGA
PROTEIN sequence
Length: 237
LLFTAVTDVLGRLAAAEEALKNVHESPRGALKITASHGIGAYWLLPRLGHFLAQYPEVEVHLVLDDKELDLAQREADLAIRMRAPVQADLIQRKLFTVHYHMYASKAYLKEHPAPRSLDEIADHSIIVYGETAVPEIRDINWLLEAYKKTARPGGKGKIIRINNITGILQATEAGLGIGVVPDYVAAEHPKLERVLPEVAAPGFDVHLVYADALRQSKRVAAFRDFAVKSSKDWQY*