name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_3100_curated_1
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2..271
|
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I2Z9_RHOVT
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_2
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
567..932
|
Translation initiation factor IF-3 n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SC65_9RHIZ
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
translation initiation factor IF-3; K02520 translation initiation factor IF-3
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_3
unknown
|
Not on your lists |
comp(1075..1563)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_4
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1665..3398)
|
Uncharacterized protein n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HPX0_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:EKV32333.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
putative glycosyl transferase, family 39
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3487..4212
|
glycosyl transferase family protein
Glycosyl transferase family 2 n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T0Z3_CAUSK
Glycosyl transferase family 2 {ECO:0000313|EMBL:ABZ73641.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_6
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria
|
Not on your lists |
4489..4662
|
hypothetical protein
Uncharacterized protein n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XN98_HIRBI
Tax=RBG_13_Aminicenantes_62_12_curated
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_trna_1
unknown
|
Not on your lists |
4770..4856
|
transferRNA
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_7
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5206..7065
|
TonB-dependent receptor {ECO:0000313|EMBL:KEQ55030.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
TonB-dependent receptor
rbh
TonB-dependent receptor n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QMD7_BRESC
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_8
unknown
|
Not on your lists |
comp(7593..7718)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_9
unknown
|
Not on your lists |
7930..8271
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria
|
Not on your lists |
comp(8926..10182)
|
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00035FD58C
rbh
mandelate racemase/muconate lactonizing protein
rbh
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:ABJ84412.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_11
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10289..10993
|
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037D7AFF
Uncharacterized protein {ECO:0000313|EMBL:ESQ79022.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE204.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_12
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
|
Not on your lists |
11064..11348
|
hypothetical protein
Uncharacterized protein n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZB48_TERRK
Uncharacterized protein {ECO:0000313|EMBL:AFL86466.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11349..12026)
|
Peptidase family M13 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QES3_BREDI
rbh
Peptidase family M13 {ECO:0000313|EMBL:EKY26478.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_14
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11981..13360)
|
peptidase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003AA60C9
Peptidase M13 {ECO:0000313|EMBL:AHX13865.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_15
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13391..14161)
|
hypothetical protein
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZE59_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:BAM92112.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_16
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14178..14783)
|
methyltransferase
Methyltransferase n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJ50_CAUST
Methyltransferase {ECO:0000313|EMBL:ADG10138.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_17
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15662..16639
|
thioredoxin reductase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B645B2
rbh
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_18
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16844..17554
|
LysR family transcriptional regulator {ECO:0000313|EMBL:KJE35825.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
LysR family transcriptional regulator n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LWM7_9PROT
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_19
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17871..18374
|
Uncharacterized protein {ECO:0000313|EMBL:KIA79848.1}; TaxID=686831 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
hypothetical protein n=1 Tax=beta proteobacterium L13 RepID=UPI00035E0BDE
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_20
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18421..19635)
|
Aspartate aminotransferase {ECO:0000313|EMBL:CDO58744.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDO58744.1};; TaxID=1458461 species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
Aminotransferase class I and II n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HVI1_PARL1
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_21
unknown
|
Not on your lists |
19846..20283
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_22
Parcubacteria bacterium GW2011_GWA2_47_64, Parcubacteria, Bacteria
|
Not on your lists |
20405..20977
|
Uncharacterized protein {ECO:0000313|EMBL:KKU76488.1}; TaxID=1618845 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_64.;"
membrane protein n=1 Tax=Methylocystis rosea RepID=UPI00037C777E
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_23
unknown
|
Not on your lists |
21048..21410
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_24
unknown
|
Not on your lists |
comp(21536..21826)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_25
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
|
Not on your lists |
21997..23403
|
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037622C6
pyrrolo-quinoline quinone repeat-containing protein
Pyrrolo-quinoline quinone repeat-containing protein {ECO:0000313|EMBL:ADV82024.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_26
unknown
|
Not on your lists |
comp(23667..23849)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_27
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria
|
Not on your lists |
24481..25227
|
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000361D7CF
Pyrrolo-quinoline quinone coenzyme N-terminus
Pyrrolo-quinoline quinone coenzyme N-terminus {ECO:0000313|EMBL:AFL89622.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).;"
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_28
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25306..25653)
|
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZX8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94057.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K09922 hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_3100_curated_29
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26206..27651
|
RND efflux system, outer membrane lipoprotein, NodT
rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family n=2 Tax=Oligotropha carboxidovorans RepID=B6JI36_OLICO
rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:AEI06675.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
|