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SCNpilot_expt_1000_bf_scaffold_5400_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(3020..3574)

Top 3 Functional Annotations

Value Algorithm Source
cell envelope biogenesis YhbN; K09774 lipopolysaccharide export system protein LptA similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 188.0
  • Bit_score: 93
  • Evalue 8.40e-17
Cell envelope biogenesis YhbN n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPI4_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 188.0
  • Bit_score: 93
  • Evalue 2.70e-16
Cell envelope biogenesis YhbN {ECO:0000313|EMBL:ABS61817.1}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 188.0
  • Bit_score: 93
  • Evalue 3.70e-16

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGAAGAAGATTGCCGCTTTCCTGTTCGCCTTCGCCGCGGGACTGGCCCTGGCCGGCCAGGTTCAGGCGCAGACTCAGACCCAGGCGCAAGCCCAGACACAGGCTCCGGCCAGGAAGCCCGTCGCGCCCAGCGCCAGCAACGCGCCCATCAACATCTCGTCGGACACCTTCCAGGCCGACCTCAACGGCAAGACCGGCACCTGGCAGGGCAATGTCGTGGTGGCCCAGGGCGACATGAAGCTGCGCGCCAATTCGGTCCGCATGACCACGGTGGACGGCAAGGCCGACAAGGTGCTGGCCAGCGGCAATGTGGTGGTGGATTCGCCCAGATCCGGCACCGCCACCGGCGACAATGGCGTCTACAATGTCGGTCCGCGCACCGTGGTGATGACGGGCAATGTGGTGCTGAAAAAGGGCCGCGACGTGATGCGCGGGGCCCAGCTCACCGTCAATCTGGCGACCGGCCAGGCGATGCTGGGCGGCGGCGCCCGCCCACCGGGCGCGCCCGCCCAGGGCGGCCGGGTGCAGGGCGTTTTCATCCCCAACAGCCAGTGA
PROTEIN sequence
Length: 185
MKKIAAFLFAFAAGLALAGQVQAQTQTQAQAQTQAPARKPVAPSASNAPINISSDTFQADLNGKTGTWQGNVVVAQGDMKLRANSVRMTTVDGKADKVLASGNVVVDSPRSGTATGDNGVYNVGPRTVVMTGNVVLKKGRDVMRGAQLTVNLATGQAMLGGGARPPGAPAQGGRVQGVFIPNSQ*