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SCNpilot_expt_1000_bf_scaffold_1897_curated_8

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(8003..9427)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor NusA n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002D8A33C similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 379.0
  • Bit_score: 591
  • Evalue 6.10e-166
  • rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 380.0
  • Bit_score: 588
  • Evalue 7.30e-165
nusA; transcription elongation protein; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 379.0
  • Bit_score: 584
  • Evalue 3.10e-164
  • rbh

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Taxonomy

Hyphomicrobium nitrativorans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1425
ATGGCCAGCGCAATTTCCGCCAACCGGCTTGAACTGTTGCAGATCGCCGACGCCGTCGCGCGCGACAAGTCCATCGACAAGCAGGTGGTGCTCACCGCCATGGAAGAGGCGATGCAGCGCGCCGCCAAGGCCCATTACGGCGCCGAGAACGACATCAAGGTGGATATCGACCCGCGCACCGGCGAAACCCATGTCTCGCGCTATCTGCATGTCGTGGAACTGGTCGAGAACGACAAGACCGAGATTTCGCTGGCCGACGCCCGCAAGCGCAATCCCGACGCCCAGATCGGCGACATCATCGCCGAGACGCTGCCGCCGGTGGATTTCAACCGCATCAACGCCCAGAACGCCAAGCAGGTGATCGTGCAGAAGGTGCGCGACGCCGAGCGCGAGCGCCAGTATGACGAATACAAGGACCGCATCGGCGAAGTGGTGCATGGCGTGGTCAAGCGCAGCGAGTTCGGCTCGGTGGTGGTGGACCTGGGCAAGGCCGAAGGCGTGGTGCGCCGCGACGAGATGATCCCGCGCGAATCCTTCCGCGCCGGCGACCGCATCCGCGCCTATATCTATGATGTGCGCCGCGAGGCCCGCGGTCCGCAGATTTTCCTGTCGCGCAGCCATCCCCAGTTCATGGTCCGCCTGTTCGCCCAGGAGGTGCCGGAAATCTATGACGGCGTGATCGAAATCCGCGCCGTGGCCCGCGATCCGGGCAGCCGCGCCAAGATCGCCGTCATCTCCAAGGACAGCAGCATCGATCCGGTCGGCGCCTGCGTCGGTATGCGCGGCGTGCGCGTGCAGGCGGTGGTGCAGGAGCTGCAGGGCGAGCGCATCGACATCATTCCGTGGAACGCCGAGGCCGCCACCTTCATCGTCAACGCCCTGGCCCCCGCCGAAGTGACCAAGGTGGTGCTGGACGAAGACACCCACCGCGTCGAGGTGGTGGTGCCCGACGAGCAGTTGTCGCTGGGCATCGGCCGCCGCGGCCAGAATGTGCGCCTGGCGTCGCAGCTCACCGGCTGGCAGATCGACATCCTGACCGAGGCCGAGGAATCGGAGCGCCGCCAGAAGGAATTCGCCGCCCGCACCGAACTGTTCATGAACAGCCTGGATGTGGACGAGACCGTGGCCCAGCTGCTGGCCTCGGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGAGGCGTTCGACGAGGAAACCGCGCAGGAACTGCAAAGCCGCGCCGTGGAGTTCATCGAGGCCCGCAACAAGGAACTGGACGACAAGCGCCTGGCGCTGGGCGTCGCGGACGATGTGCTGGCGGTGGACGGCGTCACCCCGGCCATGGCCGTGGCTCTGGGCGAGCACGACGTCAAGACCCTGGACGACCTGGCGGGCTGCGCCGGTGACGACCTGGTGGGCTATTACGAACTGA
PROTEIN sequence
Length: 475
MASAISANRLELLQIADAVARDKSIDKQVVLTAMEEAMQRAAKAHYGAENDIKVDIDPRTGETHVSRYLHVVELVENDKTEISLADARKRNPDAQIGDIIAETLPPVDFNRINAQNAKQVIVQKVRDAERERQYDEYKDRIGEVVHGVVKRSEFGSVVVDLGKAEGVVRRDEMIPRESFRAGDRIRAYIYDVRREARGPQIFLSRSHPQFMVRLFAQEVPEIYDGVIEIRAVARDPGSRAKIAVISKDSSIDPVGACVGMRGVRVQAVVQELQGERIDIIPWNAEAATFIVNALAPAEVTKVVLDEDTHRVEVVVPDEQLSLGIGRRGQNVRLASQLTGWQIDILTEAEESERRQKEFAARTELFMNSLDVDETVAQLLASEXXXXXXXXXXXXXXSRRSTRKPRRNCKAAPWSSSRPATRNWTTSAWRWASRTMCWRWTASPRPWPWLWASTTSRPWTTWRAAPVTTWWAITN*