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SCNpilot_expt_1000_bf_scaffold_1897_curated_29

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(26826..28196)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin OprB n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 413.0
  • Bit_score: 431
  • Evalue 1.00e-117
  • rbh
carbohydrate-selective porin similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 413.0
  • Bit_score: 429
  • Evalue 1.60e-117
  • rbh
Carbohydrate-selective porin {ECO:0000313|EMBL:AGG87267.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 413.0
  • Bit_score: 429
  • Evalue 7.10e-117

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGGTGGATAAGCTTTCCGGCTCGGGCTTGGTGGCAGTTTCCGCCGTTATGTTGCACCTGCTCCTGGCGGCCTGGGCTACACCCGCCAGCGCCCAAGGCGCATCCGAGGATCCGGCGGCGCGGATGCTCGCGACGGAACAGGCCGGAGGTGCATTTTCCGAGACCCTGACCGGCGCGTGGGGCGGCGCACGCAGCGATCTGCGCGATGGCGGCGTCGATCTGTACGCCAATTTCCAGACCGAAAGTGCCTGGAACCCGGTTGGAGGGAAACGGGAAGCCATTGCTTACACCCAGCAACTGGAATTTGGCGCGAATCTCGACCTTGAAAAGATGGCCGGGTTTTCCGGTACGGCATTCCACGCCCGCATGTCTCATCGCGCAGGCCGTAGCCTCGCGGCGGATGCTCTTGGCAGCATGTTCCCCGTCCAGCAGCTCTATGGCGCCGGGCAGACATTGCGGCTTTCCGAACTCAATCTGACGCAGAGCCTGCTTGACGACCGCCTGTGGCTGCGGGTCGGGTGGGCGCCGCTTGGCAATGACTTTGCAACAACCCCCATCGCATGTCCCTTCCAGAACAACATGGTATGTGGCCATGCCAGCGCGCTGACCCAAAACAGCGGCGCCCGCAACAGTCCCGTCGGGCAATGGGGCGCGCAGGCCAGATTCATGATCTCCCCGATACTCTCGGTCGCAACCGGCATTTTCCGGTTCAATCCCGATGCCGGCAACAGGGACGATGGCCTCGACCTTGGCTTTAAGGGGACCGGCGCTTTCGTTCCGGTAGAGATGGTCTGGTCGCCGCGCGACGCGGCTACCGGATTGCCGAGCACCGCCCTGAAAATCGGCGCCTACTACAACAGCGCGAAAACACCCGATGTGTATTTTGACGGAAACCACGGATCGGCCGGGCTGACCGGCCAGCCATTCCATCAGCATGATGGGCGCTGGGGCGCTTATGCCCAGATCACCCAGCGGATTTTCCGGGAACAGGCCAATCCCGCACGCGGCATGACCCTGTTCGGCCTGGGTGGGATCGGTGACGCCGCGACCGCCAGGTTCCGCCACATGATCGCTGTTGGCGGGCGGTACATGGGCACTTTTTCCGGCCGGGACGCGGATTATGTGTCACTCATTGTCGGCCGGTCGGAGATCAATCCCCGCCTCAGCCGATATCAGCGGGACAGAGACCTGGTCATGCCGGGCGCCATCGACGTCCAGACATCCGAAACATTGGTGGAAATGGACTATCACGCACAGGTCACGCCCTGGCTTTTCCTGCGGCCGAACCTGCAATATGTGATACGTCCCGGCGGCGCCGGAAAAATCCCGGATGCGTTGGTTGCCGGCCTCAGCACCCGGATCGACTTTTAG
PROTEIN sequence
Length: 457
MVDKLSGSGLVAVSAVMLHLLLAAWATPASAQGASEDPAARMLATEQAGGAFSETLTGAWGGARSDLRDGGVDLYANFQTESAWNPVGGKREAIAYTQQLEFGANLDLEKMAGFSGTAFHARMSHRAGRSLAADALGSMFPVQQLYGAGQTLRLSELNLTQSLLDDRLWLRVGWAPLGNDFATTPIACPFQNNMVCGHASALTQNSGARNSPVGQWGAQARFMISPILSVATGIFRFNPDAGNRDDGLDLGFKGTGAFVPVEMVWSPRDAATGLPSTALKIGAYYNSAKTPDVYFDGNHGSAGLTGQPFHQHDGRWGAYAQITQRIFREQANPARGMTLFGLGGIGDAATARFRHMIAVGGRYMGTFSGRDADYVSLIVGRSEINPRLSRYQRDRDLVMPGAIDVQTSETLVEMDYHAQVTPWLFLRPNLQYVIRPGGAGKIPDALVAGLSTRIDF*