ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7015_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 10888..12441

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance MFS transporter, drug:H+ antiporter-1 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVP2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 513.0
  • Bit_score: 666
  • Evalue 2.10e-188
  • rbh
DNA, contig: SP612 {ECO:0000313|EMBL:GAN12663.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 513.0
  • Bit_score: 666
  • Evalue 3.00e-188
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 516.0
  • Bit_score: 637
  • Evalue 3.30e-180
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
GTGAGCCGCGCGGCGGCGGGACATGCCCCGGCGCCGCTCACCGGCGCGGCGCTGGGCGTCACCGCCCTGGCGCTGGCGCTGGGCACCTTCATGCAGGTGCTGGACGCCACCATCGCCAATGTCTCGCTGCCCACCATCGCGGGCAATCTGGGGGCGTCCACCGACCAGGCGACCTGGGTGATCACCGCCTTCGTGGTCGCCAACGGCATCGGCGTGCCGCTGACCGGCTGGCTGATGAACCGCTATGGCGTGGTGCGGACTTTCGTGGCCTCGGTGCTGGCCTTCACCGCCATGTCCTTTCTGTGCGGCATCGCCTGGAATCTGGAGTCCCTGGTGTTCTTCCGCGCCCTGCAGGGGGCGGTGTCCGGGCCGATGATCCCCGGCTCCCAGGCGCTGCTGCTGTCCATTTTCCCCTCCAGCCGCCGCGCCACCGCGCTGGGCATCTGGTCCATCACCACGCTGGTGGCGCCGGTCTGCGGCCCGATCATCGGCGGCTATATCTCCGACAACTGGCATTGGGGCTGGATATTCCTGATCAATGTGCCGGTGGGACTGCTGGTGGCCTTCCTGTGCTGGAACAACCTGGCGTCGCGCGAGACGCCCACCGCCCGGCTGCCGATAGACGCGGTCGGCCTGGGCCTTCTGATCGTCTGGGCGGGCGCGCTGCAGATCATGCTGGACACCGGCAAGAATGCCGATTGGTTCAATTCCAGTTGGATCGTGACACTGGGCGTCATTTCGGTGGTGGGATTCTGCGCCTTCCTGCTGTGGGAGTGGACGGAGGAGCATCCCATCGTGGACCTCTCCCTGTTCCGCGACGCCAACTTCACCCTGGGCACCATCGTGCTGTGCCTGGGCAATGCGGTGTTCTTCGCCAACATGCTGCTGCTGCCGCTGTGGCTGCAAACCCAGCTCGGCTATACCGCGACCTGGGCGGGGCTGGTGACGGCCCCCACCGGCATGGTGGCGGTGCTGCTGACGCCGCTGGTGGCGCAGATGATGGCCAGGTTCGATGCCCGGCTGGTGGCCAGCGTCTCCTTTGCGGCCTCGGCGGTGTCCTATGTCATGCGCGCCGAACTGACGGCGGAGGCGGATGTCTGGGCCTTCGTGCTGCCGCTGCTGGTACAGGGCATCTCCTCGGCCACCTTCTTCATCGCCCTGGCCATGATCGTGCTGGACGGGATTCCGCCGCAGCGGATTCCGTCCGCCACCGGCCTGTCGAATTTTGTCCGCATCCTCGCCAGCGGCTTTGCGGCCTCCTTCGTCACCACCCTGTGGGACCAGCGTGAGGCTTTTCACCAGAGCCGGTTGTCGGAGGCCGCCACCGCCACCGCGCCGGCGTTCAACCATGCCCTGTCCACCCTGCAGGGACTGGGGCTGGGCGAGCTGCAGGCCAAGGTGGCGATCAGCCAGAAGATGGTGAGCCAGGCCTACCTGCTGGGGGCGCTGGACATCTTCCATCTTTCCGCCCTGGTCAGTCTGGTGCTGGTGGGCGCGGTCTGGGCCTGCCGCCGCCCGGCGCGGCATGACGCGGCGCCCGCGCCGATCGACTAG
PROTEIN sequence
Length: 518
VSRAAAGHAPAPLTGAALGVTALALALGTFMQVLDATIANVSLPTIAGNLGASTDQATWVITAFVVANGIGVPLTGWLMNRYGVVRTFVASVLAFTAMSFLCGIAWNLESLVFFRALQGAVSGPMIPGSQALLLSIFPSSRRATALGIWSITTLVAPVCGPIIGGYISDNWHWGWIFLINVPVGLLVAFLCWNNLASRETPTARLPIDAVGLGLLIVWAGALQIMLDTGKNADWFNSSWIVTLGVISVVGFCAFLLWEWTEEHPIVDLSLFRDANFTLGTIVLCLGNAVFFANMLLLPLWLQTQLGYTATWAGLVTAPTGMVAVLLTPLVAQMMARFDARLVASVSFAASAVSYVMRAELTAEADVWAFVLPLLVQGISSATFFIALAMIVLDGIPPQRIPSATGLSNFVRILASGFAASFVTTLWDQREAFHQSRLSEAATATAPAFNHALSTLQGLGLGELQAKVAISQKMVSQAYLLGALDIFHLSALVSLVLVGAVWACRRPARHDAAPAPID*