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SCNpilot_expt_1000_bf_scaffold_7015_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7015_curated_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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3..332
DNA (330bp) protein (110aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative PQQ enzyme repeat protein (Fragment) n=1 Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1E5_9ZZZZ
glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2]
SCNpilot_expt_1000_bf_scaffold_7015_curated_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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380..625
DNA (246bp) protein (82aa)
quinoprotein glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2]
Quinoprotein glucose dehydrogenase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024N0_SOLUE
Quinoprotein glucose dehydrogenase {ECO:0000313|EMBL:ABJ83546.1}; EC=1.1.5.2 {ECO:0000313|EMBL:ABJ83546.1};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCNpilot_expt_1000_bf_scaffold_7015_curated_3
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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1200..1505
DNA (306bp) protein (102aa)
Membrane protein {ECO:0000313|EMBL:KIM06940.1}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
Zinc metallopeptidase, putative id=2559936 bin=GWF1_Xanthomonadales_69_6 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein; K07054
SCNpilot_expt_1000_bf_scaffold_7015_curated_4
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1579..2187
DNA (609bp) protein (203aa)
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Uncharacterized protein n=1 Tax=Leptospira inadai serovar Lyme str. 10 RepID=V6HCE6_9LEPT
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7015_curated_5
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2557..4095)
DNA (1539bp) protein (513aa)
Amino acid/peptide transporter (Peptide:H+ symporter), bacterial n=2 Tax=Congregibacter RepID=A4AAA9_9GAMM rbh
Amino acid/peptide transporter (Peptide:H+ symporter), bacterial {ECO:0000313|EMBL:EAQ96986.2}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
amino acid/peptide transporter rbh
SCNpilot_expt_1000_bf_scaffold_7015_curated_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4167..5552)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002626383 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT96448.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_expt_1000_bf_scaffold_7015_curated_7
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5659..6651)
DNA (993bp) protein (331aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium sp. AK27.;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] rbh
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V484_HALED rbh
SCNpilot_expt_1000_bf_scaffold_7015_curated_8
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6655..8130)
DNA (1476bp) protein (492aa)
MlrC domain-containing protein (Fragment) n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2JMJ1_9BURK rbh
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; Flags: Fragment;; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_7015_curated_9
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8422..9576
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000360CFCB
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ69577.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_1000_bf_scaffold_7015_curated_10
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

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9719..10891
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035DAAE2 rbh
Membrane fusion component of tripartite multidrug resistance system {ECO:0000313|EMBL:EMD84206.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A rbh
SCNpilot_expt_1000_bf_scaffold_7015_curated_11
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10888..12441
DNA (1554bp) protein (518aa)
Drug resistance MFS transporter, drug:H+ antiporter-1 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVP2_9SPHN rbh
DNA, contig: SP612 {ECO:0000313|EMBL:GAN12663.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B rbh
SCNpilot_expt_1000_bf_scaffold_7015_curated_12
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12445..13701)
DNA (1257bp) protein (419aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF86090.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
Long-chain-fatty-acid--CoA ligase
Long-chain-fatty-acid--CoA ligase n=1 Tax=Burkholderia glumae (strain BGR1) RepID=C5A933_BURGB
SCNpilot_expt_1000_bf_scaffold_7015_curated_13
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14171..14995)
DNA (825bp) protein (275aa)
GCN5 family acetyltransferase {ECO:0000313|EMBL:ETR78099.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
N-acetyltransferase GCN5 n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LJV8_9RHIZ
N-acetyltransferase GCN5
Displaying 13 items

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