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SCNpilot_expt_1000_bf_scaffold_4779_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 11279..13165

Top 3 Functional Annotations

Value Algorithm Source
pbpC; penicillin-binding transpeptidase/transglycosylase similarity KEGG
DB: KEGG
  • Identity: 49.9
  • Coverage: 595.0
  • Bit_score: 569
  • Evalue 1.80e-159
  • rbh
Putative penicillin-binding transpeptidase/transglycosylase protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IYF5_POLGS similarity UNIREF
DB: UNIREF100
  • Identity: 49.9
  • Coverage: 595.0
  • Bit_score: 569
  • Evalue 5.60e-159
  • rbh
Putative penicillin-binding transpeptidase/transglycosylase protein {ECO:0000313|EMBL:ADZ68468.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.9
  • Coverage: 595.0
  • Bit_score: 569
  • Evalue 7.90e-159

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Taxonomy

Polymorphum gilvum → Polymorphum → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1887
ATGCTGGGCGCCTGGGGCCTGATCTTCGGCGGGCTGTTCTTCTCGCACTTCCTGTCGGGCCTGCCCGATGTCCGCAACCTGATGATTACCGGTCCGTCGCAGGACATCACCGTGCTGGACGATCACGGCCGCCAGATCGCGCGGCGCGGCCTGACGCAAGGCAGGATGGTGCAGGCGCAAGACCTGCCCGATTATGTCACCGGCGCGTTTATCGCCATCGAGGACCGGCGCTTCCGTTCGCATCTGGGCATCGATCCCATCGGCCTGACCCGCGCCGCCGTGCAGAACATGATGACGGGCCGCGTGGTGCAGGGCGGCTCCACCCTGACGCAGCAGCTGGCCAAGAATCTGTTCCTCAGCCCCAGCCGCACCATGGAGCGCAAGACCCAGGAAGCCATGCTGGCCCTGTATCTGGAGTCGCGCTATTCCAAGGACCAGATCCTCACCCTCTATCTCAACCGGGTCTATTTCGGCGCGGGCGTGTACGGTATCGCGGCGGCGTCGGAAAAGTTCTTCGGCAAGCACGCCTCCGAACTGGGCCTGACCGAAGCGGCCATGCTGGCGGGCAGCGTCAAGGCCCCCGCGCGCTACAATCCGGTCGCCGATACCGACGCCAGCTTGGCCCGCGCCCAGGTGGTGCTCAAGGCGATGGAAAGCGCGGGCGTGATCGATGCAAGCACCCGCGCCCTGGCCCAGGCCACCCGCCCCCGCATCATGCGGACCAACGGCACGCCGGGCTCGGGCTGGTTCGCCGACTGGGTGATGGCGCATCTGAACGAGCATGTCGCGCCCACCGGCGAGCCGGTGATCGTGGAGACCAGCTTCGATCTGGAAACCCAGCGCCTGGCCGAGCGCGCCGTGGCGCGGGCCCTGGCCCATGACGGCGAGGCGCTGCGCGCCGGACAGGCGGCGCTGGTGGCGATGACGCCCGATGGCGCGGTGCGCGCCATGGTGGGCGGGCGCAGCTATGCCGCCTCCACATTCAACCGCGCCACCGACGCCCAGCGCCAGCCCGGCAGCGCCTTCAAGCCCTTCGTCTATCTGGCGGCGCTGGAACATGGCCACACGCCCGGCGAGATCGTCAACGACACGCCGATCGACATCAAAGGCTGGAAGCCGCAGAATTATGAAGGCCGCTTCAAGGGCCGGATGCCGCTGATCCAGGCCTTCGCGCAGTCCTCCAACTCGGTCGCCAGCCAGCTCACCGCCGAGCTGGGGCCGCGCACCGTGGCGCGCACCGCCCACAGGCTGGGTATCACCTCGCCGCTGATGGAAGTCTCGTCCCTGGCGCTGGGCACCTCGGTGGTCACGCCGCTGGAACTGACCGGTGCCTATGCGCCCTTCGCCAATGGCGGCGTGGGCGTCCAGCCCTTCGGCATCCTGCGCGTGCGCACCAAGTCGGGCAAGATTCTGTATGAACGCAAGCCGCAGGATCCGGACGCGGTGATGCGCCCCGCCGACAATCTGCAGATGACGCGGCTGATGATGGAAACCGTCGCCACCGGCACCGGCAAGGCGGGACGCCTGCAGGACCGGCCCACCGCCGGAAAGACCGGCACCACACAGGACTTCCGCGATGCCTGGTTCGTGGGCTTCACCGCCGACCTGGTCTGCGGCGTGTGGATCGGCAATGACGACAACAGCCCCATGATCAAGGCCACGGGCGGCGGACTTCCGGCGCGCATCTTCCAGGCCTTCATGACCGATGCCGAGGCGGGCCTGCCGGTGCGCCCCCTGACCGGCACGACCCTGGCCGACGCCACGCTGGTGGCCGAGACGCAAGCGGCTCCGGAGACGGACGCACCGGAAATCGTCACGGCCCAGAAGCCGGACGAAAAGACCGACACCTTGCAGAAGCTGCTCAACGGATTGTTCGGGGGGACTTGA
PROTEIN sequence
Length: 629
MLGAWGLIFGGLFFSHFLSGLPDVRNLMITGPSQDITVLDDHGRQIARRGLTQGRMVQAQDLPDYVTGAFIAIEDRRFRSHLGIDPIGLTRAAVQNMMTGRVVQGGSTLTQQLAKNLFLSPSRTMERKTQEAMLALYLESRYSKDQILTLYLNRVYFGAGVYGIAAASEKFFGKHASELGLTEAAMLAGSVKAPARYNPVADTDASLARAQVVLKAMESAGVIDASTRALAQATRPRIMRTNGTPGSGWFADWVMAHLNEHVAPTGEPVIVETSFDLETQRLAERAVARALAHDGEALRAGQAALVAMTPDGAVRAMVGGRSYAASTFNRATDAQRQPGSAFKPFVYLAALEHGHTPGEIVNDTPIDIKGWKPQNYEGRFKGRMPLIQAFAQSSNSVASQLTAELGPRTVARTAHRLGITSPLMEVSSLALGTSVVTPLELTGAYAPFANGGVGVQPFGILRVRTKSGKILYERKPQDPDAVMRPADNLQMTRLMMETVATGTGKAGRLQDRPTAGKTGTTQDFRDAWFVGFTADLVCGVWIGNDDNSPMIKATGGGLPARIFQAFMTDAEAGLPVRPLTGTTLADATLVAETQAAPETDAPEIVTAQKPDEKTDTLQKLLNGLFGGT*