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SCNpilot_expt_1000_bf_scaffold_6110_curated_18

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 9819..11090

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimonas sp. 20V17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.0
  • Coverage: 422.0
  • Bit_score: 535
  • Evalue 6.50e-149
Diaminopimelate decarboxylase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FLT1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 421.0
  • Bit_score: 525
  • Evalue 6.30e-146
  • rbh
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 422.0
  • Bit_score: 517
  • Evalue 4.10e-144
  • rbh

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Taxonomy

Defluviimonas sp. 20V17 → Defluviimonas → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGGTCAACCACTTCCAGTACCGCGATGGCGTGCTCTGCGCCGAGGAGGTGCGGCTGGACGAACTGGCGCGCGCCGTCGGCACGCCCTTTTATTGCTATTCCACCGCCACGCTGGAGCGTCATTTCAAGGTGTTCGCGGGCGCGCTGCCGCCGGGCTCGCTGATCGCCTACGCGGTCAAGGCCAACGACAATCTGGCGGTTCTCAAAACACTGGCGAAGCTGGGCGCGGGCGCCGATGTGGTGTCGGGCGGCGAACTGGCCAAGGCGCGGGCGGCGGGCATTCCCGCCGGCAAGATCGTCTTTTCCGGCGTGGGCAAGACCAAAGCCGAGATGCGCGCCGCGCTGGACGCGGGCATCCATCAGTTCAATGTCGAGAGCGAGCCGGAACTGGCGGCGCTGAACGAAGTCGCCCTGGCGATGGGCAAGCGCGCGGCCATCTCGCTGCGGATCAATCCCGATGTGGACGCCAAGACCCACGCCAAGATCAACACCGGCAAGGCCGAGACGAAGTTCGGGATTCCCTTTGTCCATGCGCGCGAGGCCTATGCCCATGCCGCCACCCTGGCGGGCATCGAGATCGTGGGCGTGGATGTGCATATCGGCAGCCAGATCACCGATCTCGATCCCTTCGAGGCCGCCTTCACCCGCATCGGCGAGTTGATCGCCAGCCTGCGCGCCGACGGCCATGCCATCAGCCGTCTGGATTGCGGCGGCGGCCTGGGCGTGCCCTATGTCCACGACAACAGCCCGCCGNNNNNNNNNNNNNNCTATGGCGCGATGGTGACGCGGGTGACCAAGNNNNNNNNNNNNNNNCTGTCCTTCGAGCCGGGCCGCCTGATCGCCGCCAATGCGGGCATCCTGGTGTCGGAGGTGATCTATGTGAAGCGCGGCGACGCCAAGACCTTCCTGATCATCGACGCCGGCATGAACGATCTGATCCGTCCGGCCATGTATGACGCCTGGCATGAGATCGTGGCGGTCCAGGAACCGGCGCCCGGTTCCCCGCGCCCGCTTTACGATGTGGTGGGGCCGGTGTGCGAAACCAGTGACCTTTTCGCGGCGGCGCGGCCGCTGCCGGACCTGAAATCGGGCGATCTTGTGGCAATCCTGTCGGCGGGCGCCTATGGCGCGGTGATGGCGGGTGATTACAATGCCCGGCCGCGCGTGCCGGAAGTCTTGGTGTCGGGCGGCCAATGGGGCATCGTGCGTCCCAGAGAGAGCCATGCCGATCTCATCGCCAAGGACCGCATTCCCGACTGGCTTTCCGGCTGA
PROTEIN sequence
Length: 424
MVNHFQYRDGVLCAEEVRLDELARAVGTPFYCYSTATLERHFKVFAGALPPGSLIAYAVKANDNLAVLKTLAKLGAGADVVSGGELAKARAAGIPAGKIVFSGVGKTKAEMRAALDAGIHQFNVESEPELAALNEVALAMGKRAAISLRINPDVDAKTHAKINTGKAETKFGIPFVHAREAYAHAATLAGIEIVGVDVHIGSQITDLDPFEAAFTRIGELIASLRADGHAISRLDCGGGLGVPYVHDNSPPXXXXXYGAMVTRVTKXXXXXLSFEPGRLIAANAGILVSEVIYVKRGDAKTFLIIDAGMNDLIRPAMYDAWHEIVAVQEPAPGSPRPLYDVVGPVCETSDLFAAARPLPDLKSGDLVAILSAGAYGAVMAGDYNARPRVPEVLVSGGQWGIVRPRESHADLIAKDRIPDWLSG*