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SCNpilot_expt_1000_bf_scaffold_16224_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2..862)

Top 3 Functional Annotations

Value Algorithm Source
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 290.0
  • Bit_score: 249
  • Evalue 1.40e-63
Protein translocase subunit SecD n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXL0_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 290.0
  • Bit_score: 249
  • Evalue 4.50e-63
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.8
  • Coverage: 290.0
  • Bit_score: 249
  • Evalue 6.30e-63

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 861
GTGCTGCAAGTTTCCATCTGGACGCGCCTTCTGGTCCTCTTCATCGTGCTGGGGGGGATTCTGATCGCGCTGCCCAACGCGCTGCCGGAAAATGTCCGCGCCAAGATGCCCTCCTGGCTGCCGTCCTCGACGGTCAATCTGGGCCTGGACCTGCAGGGCGGCTCCTACCTGCTGCTGCAGGTGGACCTGGACCAGGTGACGCGCGACCGGGCCGAGGCGGTGGTTGGCGACATCCGCGCCGGCCTGCGCAAGGCCCGCATTCCCTTCACCAACCTGGCGGCGCGCGGCGACACCGTCACCGTCAAGGTCTCCGATCCCGCCCGCCTGGAAGAGGCGCGCAAGCTGGTGCAGGGCCTGAATCCCAGCCTGTCCGGCTCGGTGATGGGCGTCGGCGGCAGCCAGTATGATTTCAGCAGCACCGCCGACGGCGGCATGACGCTGAAGATGACCGACGCCTACAAGGCCCTGACGCGCCAGCAGGTGCTGGACCAGTCCATCGAGGTGGTCCGCCGCCGCATCGACGAACTGGGCACCCGCGAGCCCGCCATCGAGCGGTCGGGCGACGACCGCATCCTGGTGCAGGTGCCGGGCCTGCAGGACCCCACCCAGCTCAAGAACATCCTGGGCAAGACCGCCAAGATGACCTTCCAGCTGGTGGACGAGCAGGCCAATCCCAATTCGCCCATCGCCCCCATCGGCTCGGAAATCCTCACCTTGATGGAATCCAACGCCAACCTGCCGCCCCAGAAGATCGTGGTGCAGCGCCGGGTGATGGTGTCGGGCGACCGGCTGACCGACGCGGGCGTGGGTTTCGACCAGCAGACCGGCCGCGCCGTCGTCACCTTCCGCTTCGACAGCGTG
PROTEIN sequence
Length: 287
VLQVSIWTRLLVLFIVLGGILIALPNALPENVRAKMPSWLPSSTVNLGLDLQGGSYLLLQVDLDQVTRDRAEAVVGDIRAGLRKARIPFTNLAARGDTVTVKVSDPARLEEARKLVQGLNPSLSGSVMGVGGSQYDFSSTADGGMTLKMTDAYKALTRQQVLDQSIEVVRRRIDELGTREPAIERSGDDRILVQVPGLQDPTQLKNILGKTAKMTFQLVDEQANPNSPIAPIGSEILTLMESNANLPPQKIVVQRRVMVSGDRLTDAGVGFDQQTGRAVVTFRFDSV