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SCNpilot_expt_1000_bf_scaffold_16224_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_16224_curated_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..862)
DNA (861bp) protein (287aa)
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD
Protein translocase subunit SecD n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXL0_PARL1
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; Flags: Precursor;; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_16224_curated_2
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(869..1171)
DNA (303bp) protein (101aa)
yajC; preprotein translocase, auxillary membrane component; K03210 preprotein translocase subunit YajC
Preprotein translocase, auxillary membrane component (General Secretory Pathway), YajC subunit n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J669_HYPSM
Preprotein translocase, auxillary membrane component (General Secretory Pathway), YajC subunit {ECO:0000313|EMBL:CCB65894.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SCNpilot_expt_1000_bf_scaffold_16224_curated_3
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2082..2786)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B371B0
Uncharacterized protein {ECO:0000313|EMBL:ETR75243.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
lppB; peptidase M23B
SCNpilot_expt_1000_bf_scaffold_16224_curated_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2891..3676)
DNA (786bp) protein (262aa)
stationary phase survival protein SurE n=1 Tax=Methylosinus sp. LW4 RepID=UPI000372D673
stationary-phase survival protein SurE; K03787 5'-nucleotidase [EC:3.1.3.5]
5'-nucleotidase SurE {ECO:0000255|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000255|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000255|HAMAP-Rule:MF_00060}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_expt_1000_bf_scaffold_16224_curated_5
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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3786..4430
DNA (645bp) protein (215aa)
Tax=RBG_13_Aminicenantes_59_9_curated
SCNpilot_expt_1000_bf_scaffold_16224_curated_6
unknown

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comp(4417..5133)
DNA (717bp) protein (239aa)
uncharacterized LOC100075123; K13172 serine/arginine repetitive matrix protein 2
Uncharacterized protein (Fragment) n=2 Tax=Ornithorhynchus anatinus RepID=F7B6H4_ORNAN
SCNpilot_expt_1000_bf_scaffold_16224_curated_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5291..6091
DNA (801bp) protein (267aa)
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HY73_PARL1
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Displaying 7 items

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