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SCNpilot_expt_1000_bf_scaffold_8251_curated_18

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 16282..16656

Top 3 Functional Annotations

Value Algorithm Source
Cell wall shape-determining protein {ECO:0000313|EMBL:KJB96403.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 124.0
  • Bit_score: 134
  • Evalue 7.60e-29
rod shape-determining protein RodA; K05837 rod shape determining protein RodA similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 124.0
  • Bit_score: 129
  • Evalue 7.10e-28
Rod shape-determining protein RodA n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HW09_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 124.0
  • Bit_score: 129
  • Evalue 2.30e-27

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Taxonomy

Skermanella aerolata → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
GTGGCGCTGGCGCTGCTGATCGCGGTGGATGTGGCGGGCCATATGGGGCTGGGGGCGCAACGCTGGATCAGCCTGGGCGGGGTGGACCTGCAACCGTCGGAACTGATGAAGATCGGGCTGGTGCTGGCGCTGGCCCGCTATCTGCACGGCAAGAGCATCGAGGATGTTTCCCGGCCCGGGCCGCTGGCCATCGGCCTGGCGATGATCGGCATCCCCGCCATCTTCGTGCTGCTGCAGCCCAATCTGGGCACCACCCTGATCATCATCATGGACGGCTGCGCGCTGCTGTTCCTGGCGGGCCTGTCCTGGTACTGGATCGCGCCCACCCTGGCGGCGGTGGCGGCGGCGATTCCGCTGGCCTGGCAGTTCCTGCTG
PROTEIN sequence
Length: 125
VALALLIAVDVAGHMGLGAQRWISLGGVDLQPSELMKIGLVLALARYLHGKSIEDVSRPGPLAIGLAMIGIPAIFVLLQPNLGTTLIIIMDGCALLFLAGLSWYWIAPTLAAVAAAIPLAWQFLL