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SCNpilot_expt_1000_bf_scaffold_16772_curated_3

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1922..2239

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B68FBD similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 87.0
  • Bit_score: 90
  • Evalue 1.30e-15
rluC; 23S rRNA pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 93.0
  • Bit_score: 89
  • Evalue 5.30e-16
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.2
  • Coverage: 93.0
  • Bit_score: 89
  • Evalue 2.40e-15

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Taxonomy

Azospirillum brasilense → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 318
ATGGTTGAGAGCGTCGCCATCGCCGCCGATGACGACGGCATCCGTCTCGACCGCTGGTTCCGGCGGCATTATCCGGCGGTGAACCACACCCTGCTGGAAAAGCTGCTGCGCAAGGGCGAAATCCGCCTGGACGGCAAGCGCGCCGACGCCAAGACGCGGGTGGCGGCGGGTCAGGCGATGCGCCTGCCGCCGCAGGTGATCCACGCCAAGACCGAGGCGCGGGAGAAAGACAAACCGACCTGCGCCGCCCATCCGCTGGCGACCAAGGATATGGGCAGCCTGGCNNNNNNNNNNNNNNNNNTATGGACAAGCAGGTGA
PROTEIN sequence
Length: 106
MVESVAIAADDDGIRLDRWFRRHYPAVNHTLLEKLLRKGEIRLDGKRADAKTRVAAGQAMRLPPQVIHAKTEAREKDKPTCAAHPLATKDMGSLXXXXXXXWTSR*