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SCNpilot_expt_1000_bf_scaffold_6204_curated_10

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(10422..10877)

Top 3 Functional Annotations

Value Algorithm Source
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 140.0
  • Bit_score: 151
  • Evalue 9.50e-34
exbD; biopolymer transport protein ExbD; K03559 biopolymer transport protein ExbD similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 146.0
  • Bit_score: 145
  • Evalue 1.50e-32
Biopolymer transport protein ExbD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HUU1_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 146.0
  • Bit_score: 145
  • Evalue 4.80e-32

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Taxonomy

R_Betaproteobacteria_66_14 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGGCCGTTGACGTCCAGAAAGCGATCGAGCACGAGGAAGACGAACTGAACGTCTCCATCAACACGACCCCCTTGGTGGACGTGATGCTGGTGATGCTCATCATCTTCCTCGTCACCATCCCGGTGATCGTGAAGACGGTGCCTCTGGAGCTCCCGACCTATCGCAATATCGTTACGGTGACGAAGCCGGAAAATATCGTGATCGCGGTCGATGCCGACGAGAACACCTACTACAACAATGTGCCTGTGGATCAGCAGACGATGCGCGCGAACTTCGTCGACGCCCTGAAAAGGGCCGTCGCCGAAGGGAAGGCGTTCCCCGAAGTGCATATCCGCGGTGACAAGGGCGTGCGTTTCGAGGCGATCGGCCGCGTGATCCTGGCCTGTCAGCAGGCCGGTATCCAGAAGGTCGGCTTCATCACGGAACCGCACAATCTTGACGCCAACAGCTACTAA
PROTEIN sequence
Length: 152
MAVDVQKAIEHEEDELNVSINTTPLVDVMLVMLIIFLVTIPVIVKTVPLELPTYRNIVTVTKPENIVIAVDADENTYYNNVPVDQQTMRANFVDALKRAVAEGKAFPEVHIRGDKGVRFEAIGRVILACQQAGIQKVGFITEPHNLDANSY*