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SCNpilot_expt_1000_bf_scaffold_10838_curated_13

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 12633..13034

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489C54 similarity UNIREF
DB: UNIREF100
  • Identity: 61.9
  • Coverage: 134.0
  • Bit_score: 168
  • Evalue 3.60e-39
Phyllosphere-induced regulator PhyR {ECO:0000313|EMBL:AJP72033.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.4
  • Coverage: 134.0
  • Bit_score: 167
  • Evalue 1.50e-38
two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 134.0
  • Bit_score: 166
  • Evalue 4.30e-39

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGCTGACCGCCGTGGAGGCCTTCAGCCTGGAGGAAGCCGCCTTCATCATCGACGAGACCCCGGAGGAGGTGGAAGCCGCCATCCTGGGGGCGCAGAAGACCATCGACAGCCAGCTGGCCAGCAAGGTGCTGATCATCGAGGACGAGCCCATCATCGCCATGGACCTGGAAAATCTGGTCACCGAACTGGGCCACAAGGTGGTGGCGGTCGCCGCCACCAAGGATGATGCGGTGGCCAAGGCCAAGTCCGAACGCCCCGGCCTGGTGCTGGCCGACATCAATCTGGGCGAAGGTGGCAGCGGCATCGACGCGGTCAGCGAAATCCTGGCCAGCTTCGACATTCCGGTGATCTTCATCACCGCCTATCCGGAAAAGCTGTTGACGGGCGAGCGGCCGGAGCCG
PROTEIN sequence
Length: 134
MLTAVEAFSLEEAAFIIDETPEEVEAAILGAQKTIDSQLASKVLIIEDEPIIAMDLENLVTELGHKVVAVAATKDDAVAKAKSERPGLVLADINLGEGGSGIDAVSEILASFDIPVIFITAYPEKLLTGERPEP