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SCNpilot_expt_1000_bf_scaffold_11420_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 8386..9057

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC12C similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 225.0
  • Bit_score: 248
  • Evalue 7.80e-63
Two-component response regulator {ECO:0000313|EMBL:EJU12600.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 227.0
  • Bit_score: 239
  • Evalue 3.90e-60
OmpR family two-component response regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 222.0
  • Bit_score: 227
  • Evalue 4.50e-57

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGAACATTCTTCTTCTGGAAGACGATCCGCAGGCCGCGATTCCCACCGTGGATGGGTTGGAGGCGCTGGGCCACCGCGTCGATCACGAAACCAGCGGCGCGGCCGCGCTGAAGAGGGCAGCCGCCACCGCCTATGATGCCGTCGTGCTGGAGCGTCTGGTGGCGGACATGGACGGTCTGTCGGTCCTGCGCGCGCTGCGCGCCGGGGACAATCCGGTGCCGGTTCTTTTCCTGACGGCGCTGTCGGGGGTCGCGGACCGGGTGGAGGGCCTGCGGGCGGGCGCCGACGACTATCTGACCAAGCCTTTCGCCTTCGCCGAGCTGGCCGCGCGGCTGGACGTCCTGTTCCGCCGGGGGCCTATGGGCGCCGTCCTGCGGTTTGCCTCGATCGAGATGAATCTGATGGACCGCACGGTGCGCCGCGCGGGCAGGCCGGTACATCTGCAGAATCGTGAATTCCGCCTGCTCGAACAGCTCATGCGCCATCCGTCCGATGTCGTGAGCCGCGCGATGCTGCTCCGCAAGGTCTGGAATTTCCAGTTCGATCCCCGGACCAATATCGTCGAAAGCCATATGAGCCGCTTGCGGACCAAGCTGAATCTGGGCTTCCGGTCCGATGCCGTGCGGACCGTGCGCGGCGCCGGTTACCGGATGAACGCCGATGCCGATTGA
PROTEIN sequence
Length: 224
MNILLLEDDPQAAIPTVDGLEALGHRVDHETSGAAALKRAAATAYDAVVLERLVADMDGLSVLRALRAGDNPVPVLFLTALSGVADRVEGLRAGADDYLTKPFAFAELAARLDVLFRRGPMGAVLRFASIEMNLMDRTVRRAGRPVHLQNREFRLLEQLMRHPSDVVSRAMLLRKVWNFQFDPRTNIVESHMSRLRTKLNLGFRSDAVRTVRGAGYRMNADAD*