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SCNpilot_expt_1000_bf_scaffold_11420_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_11420_curated_1
unknown

Not on your lists

comp(3..272)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11420_curated_2
RLO_OD1_Kaiserbacteria_45_26, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

714..1130
DNA (417bp) protein (139aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Kaiserbacteria_45_26_curated
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HMZ3_9BRAD
histone-lysine N-methyltransferase (EC:2.1.1.43); K07117
SCNpilot_expt_1000_bf_scaffold_11420_curated_3
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1244..2275
DNA (1032bp) protein (344aa)
Tat (Twin-arginine translocation) pathway signal sequence n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P0X4_9BRAD rbh
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:EKS36232.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
SCNpilot_expt_1000_bf_scaffold_11420_curated_4
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2374..2892
DNA (519bp) protein (173aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M9I2_METRJ
Uncharacterized protein {ECO:0000313|EMBL:ACB28157.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
SCNpilot_expt_1000_bf_scaffold_11420_curated_5
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3149..3742
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PEF3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EDL47793.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
Ferric reductase-like transmembrane component, N-terminal domain-containing protein
SCNpilot_expt_1000_bf_scaffold_11420_curated_6
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

3830..4276
DNA (447bp) protein (149aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD09B8
competence protein ComEA; K02237 competence protein ComEA
SCNpilot_expt_1000_bf_scaffold_11420_curated_7
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4384..5097
DNA (714bp) protein (238aa)
cell envelope biogenesis protein TonB n=1 Tax=Perlucidibaca piscinae RepID=UPI0003B426E8
tonB1; putative TonB protein; K03832 periplasmic protein TonB
TonB family protein {ECO:0000313|EMBL:ACR02112.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
SCNpilot_expt_1000_bf_scaffold_11420_curated_8
unknown

Not on your lists

comp(5459..5632)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11420_curated_9
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6116..7552
DNA (1437bp) protein (479aa)
Tax=BJP_IG2103_Dechloromonas_63_51
Tonb-dependent receptor n=1 Tax=Thauera sp. 27 RepID=N6Y7U9_9RHOO rbh
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_expt_1000_bf_scaffold_11420_curated_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7972..8346
DNA (375bp) protein (125aa)
hydroxylase; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
PKHD-type hydroxylase Dtpsy_0528 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=Y528_ACIET
PKHD-type hydroxylase Dtpsy_0528 {ECO:0000255|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000255|HAMAP-Rule:MF_00657};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_expt_1000_bf_scaffold_11420_curated_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8386..9057
DNA (672bp) protein (224aa)
XRE family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC12C
Two-component response regulator {ECO:0000313|EMBL:EJU12600.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
OmpR family two-component response regulator; K02483 two-component system, OmpR family, response regulator
SCNpilot_expt_1000_bf_scaffold_11420_curated_12
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

comp(9193..9753)
DNA (561bp) protein (187aa)
Tax=RBG_16_Acidobacteria_64_8_curated
SCNpilot_expt_1000_bf_scaffold_11420_curated_13
unknown

Not on your lists

comp(10102..10410)
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_11420_curated_14
Commensalibacter intestini, Commensalibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10636..11067)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=Commensalibacter intestini A911 RepID=G6EYG8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EHD14556.1}; TaxID=1088868 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae.;" source="Commensalibacter intestini A911.;"
hypothetical protein; K09800 hypothetical protein
Displaying 14 items

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