ggKbase home page

SCNpilot_expt_1000_bf_scaffold_10386_curated_12

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(8137..8493)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbI n=1 Tax=Sphingobium lactosutens DS20 RepID=T0ISP3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 119.0
  • Bit_score: 191
  • Evalue 4.60e-46
Conjugal transfer protein TrbI {ECO:0000313|EMBL:EQB14820.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 119.0
  • Bit_score: 191
  • Evalue 6.50e-46
conjugal transfer protein trbI; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 117.0
  • Bit_score: 186
  • Evalue 6.10e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
GTGGTCTGGCAGCGTATTATCATGCCGGACGGTTCCTCCATCCAGATCGACAATTTGCCCGCCACGGATTCGGCCGGCTATTCCGGTCTAGAGGATGAAGTCGATTATCACACCTGGACATTGATCAAAGGGGTTGCGATTTCTACCTTGCTTGGTATCGGCAGCCAACTGGCGATCAGCGGTCAAAGCGATCTGCTTCTGTCGATCCGCAACTCGACACAGGACAGCGTCAACCAGGCCGGCCAGCAGCTCACGCAGAAGAACTTGAATATTCAGCCGACCATCAAGGTCCGGCCCGGCTGGCCGCTTCGCGTGATCATTCACAAAGACCTTGTTATGCGACCTTACAGAGGATGA
PROTEIN sequence
Length: 119
VVWQRIIMPDGSSIQIDNLPATDSAGYSGLEDEVDYHTWTLIKGVAISTLLGIGSQLAISGQSDLLLSIRNSTQDSVNQAGQQLTQKNLNIQPTIKVRPGWPLRVIIHKDLVMRPYRG*