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SCNpilot_expt_1000_bf_scaffold_10386_curated_15

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(10384..11067)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbF n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HRU6_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 227.0
  • Bit_score: 340
  • Evalue 1.20e-90
  • rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EQB14818.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 227.0
  • Bit_score: 340
  • Evalue 1.70e-90
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 227.0
  • Bit_score: 330
  • Evalue 3.80e-88
  • rbh

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Taxonomy

Sphingobium lactosutens → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGTTTCGTCGTGCCCTGCAGCGCTATGGCGCTACCCCCGAGCCCGCGACGCCCTACCAGCGCGCCGCCCAAATCTGGGATGACCGCATCGGCTCTTCCCGTGTGCAGGCGAGGAACTGGCGGCTGATGGCGTTGGGAGGCTTGGGCTTGGCTTTCGTGCTGAGCGGCGCCCTGGCCTGGCAGTCGGCGCAGAGCCGGATTGTTCCCTACGTCGTGCAGGTCGATAAGTTCGGCGCGGTCCAGGCGGTGGGGCCGGCCGTGCAGAATTACGTCCCAACCGACGCAGAGATCGCCTGGTATCTGGGACGCTTCATTACCGACGTTCGCAGTCTCAGCCTCGATCCGGTTGTCGTCCGCCGCAACTGGCTGGAAGCATACGACTACGCCACCGACCGCGGCGCGACATTCCTCAACGAATTCGCCCGCGCCAACGATCCTTTTAAAGCCATCGGCGAACGCACCGTCTCCGTGCAGGTAAGCAGCGTCGTGCGGATGTCCGACAAATCGTTCCAGGTGAAGTGGAACGAGCAGACCTTCGAGCAAGGCGCACTGGCCAAGACCGAACGCTGGACCGCGATCCTGTCCGTCGTCACCAAGACGCCGACGACGGCAGAAGTCCTCAAGAAAAATCCGCTCGGTCTGTACGTCAACGCTGTGAACTGGTCTCGCGAGCTGGACAATTAG
PROTEIN sequence
Length: 228
MFRRALQRYGATPEPATPYQRAAQIWDDRIGSSRVQARNWRLMALGGLGLAFVLSGALAWQSAQSRIVPYVVQVDKFGAVQAVGPAVQNYVPTDAEIAWYLGRFITDVRSLSLDPVVVRRNWLEAYDYATDRGATFLNEFARANDPFKAIGERTVSVQVSSVVRMSDKSFQVKWNEQTFEQGALAKTERWTAILSVVTKTPTTAEVLKKNPLGLYVNAVNWSRELDN*