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SCNpilot_expt_1000_bf_scaffold_10386_curated_18

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(12449..13171)

Top 3 Functional Annotations

Value Algorithm Source
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48482.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 242.0
  • Bit_score: 241
  • Evalue 1.40e-60
conjugal transfer protein TrbJ similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 238.0
  • Bit_score: 235
  • Evalue 1.40e-59
P-type conjugative transfer protein TrbJ n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU73_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 238.0
  • Bit_score: 235
  • Evalue 4.30e-59

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 723
GGCCGCCGAATGAAACGTCTTCGCTCCCTTATCTTTGCTCTGTCGCTCTCCGTCGCAACCTTCTCACCCGCGGCGGCGCAGTGGACCGTGTTCGATCCGCAGAACTATGCCCAGAACGTTCTCGAAGCAGCCCGGGCCTTGGAGCAAATCAACAATCAGATTCAATCGCTGCAGAACGAAGCCTCGATGCTGCGCAACATGGCGGCGAACCTTAACCCACTGAAAAGCATCCCGCAGATGAGCGGCATGGCTTCGACATTGGGCCAGATCAGCGCGCTGATAAACCAGGCGCAAGGCATCTCCTTCAATGTCAACGCCACCATGGCGGCGTGGGCCAAGTCGCATCCGTCGTCCTATGCGGCTGGCACCAGCGCTGCGACTTTGCAGGCGAATGCGCAGCAGCGCTGGCAGAACTCCATGTCGGCCTTCCAAGATACGCTCAAAATACAATCACAAGTGGCCCAAAACATCGAGGCTGACACCAGTGCCCTGACGGCACTGTCCGATGCGTCGCAGAACGCCAGCGGCAATCTCGAAGTCACGCAGGCGACAAACCAGCTCCTGGCGCTGTCCACCAAGCAGCAATTGCAAATCCAGAGCCTGATGGCCGCGCAATATCGCGCGGCGGCGTTGGACCGGGCGCGTAACGCGCAGGCGGAGCAGGAAGGCCAGGTCCAGTTTCAGACATTCTTGGGCAGCAGCAACGCCTACACACCGCAATAG
PROTEIN sequence
Length: 241
GRRMKRLRSLIFALSLSVATFSPAAAQWTVFDPQNYAQNVLEAARALEQINNQIQSLQNEASMLRNMAANLNPLKSIPQMSGMASTLGQISALINQAQGISFNVNATMAAWAKSHPSSYAAGTSAATLQANAQQRWQNSMSAFQDTLKIQSQVAQNIEADTSALTALSDASQNASGNLEVTQATNQLLALSTKQQLQIQSLMAAQYRAAALDRARNAQAEQEGQVQFQTFLGSSNAYTPQ*