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SCNpilot_expt_1000_bf_scaffold_7562_curated_2

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1260..1736

Top 3 Functional Annotations

Value Algorithm Source
ispA; geranyltranstransferase (EC:2.5.1.10); K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 159.0
  • Bit_score: 147
  • Evalue 3.20e-33
Geranyltranstransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P412_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 159.0
  • Bit_score: 147
  • Evalue 1.00e-32
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:KJR64395.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 159.0
  • Bit_score: 147
  • Evalue 1.40e-32

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Taxonomy

Azospirillum thiophilum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
GTGCGCTGCGCCCTGATCGCGCGCCTGGCCGAAGCGGGCGGGCACAGCGGCATGATCGGCGGCCAGATCATCGACATGCTGGCCGATGCGAGCTTCGGGGTGGACGATGTGATCGACCTGCAACGCCGCAAGACCGGCCAGTTGTTCGAATTCTCCTGCGAGGCGGGCCCGATCCTGGGCGGCGCGTCGGCGCAAGACCGCGCCCGGCTCAAGGCCTATGCCGAGGAGATGGGCGTGGTGTTCCAGATCACCGACGATCTGCTGGACGTGACCTCCACCGCCGAAAAGACCGGCAAGGCGGTGGGCAAGGACGCCGATGCGGGCAAACAGACCCTGGTGACCCTGCTGGGACTGGACGGCGCCCGCGCCGAGGCCCAAAAGCGCGCCCGCGCCGCGGTGGATGCGCTGGGGCCTTATGCCGAAAAGGCGCCGGAACTGTCGGCGCTGCCCTTCTTTCTGCTGGACCGGGACGCCTGA
PROTEIN sequence
Length: 159
VRCALIARLAEAGGHSGMIGGQIIDMLADASFGVDDVIDLQRRKTGQLFEFSCEAGPILGGASAQDRARLKAYAEEMGVVFQITDDLLDVTSTAEKTGKAVGKDADAGKQTLVTLLGLDGARAEAQKRARAAVDALGPYAEKAPELSALPFFLLDRDA*