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SCNpilot_expt_1000_bf_scaffold_7562_curated_11

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(7607..9076)

Top 3 Functional Annotations

Value Algorithm Source
Two component sigma-54 specific Fis family transcriptional regulator {ECO:0000313|EMBL:GAK45661.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.2
  • Coverage: 466.0
  • Bit_score: 567
  • Evalue 1.40e-158
two component sigma-54 specific Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 481.0
  • Bit_score: 560
  • Evalue 6.40e-157
  • rbh
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUT1_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 481.0
  • Bit_score: 560
  • Evalue 2.00e-156
  • rbh

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Taxonomy

alpha proteobacterium MA2 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
ATGCAGGTCGTCACCGCCCCCGGCGGCGGCCCCGCCCTGGACCTGATCAACGGTCCGCGCGGCGAGCAGATCACCCTGATGCTGCTGGACCTGGTAATGCCCGACATGGGCGGCCTGGAGGTTCTGGCCCAGCTGCGTCCCACCAATCCCGACCTGCCGGTGATCGTTCTGACCGCCAAGGGCGGCATCGACAGCGCCGTGGAAGCCATGCGGGCGGGCGCCAACGACTTTCTGGTCAAGCCGGCCAGCCCGGAACGCATCGCCGTCTCGATCCGCAACCAACTCAAGATCGGCACCCTGTCCGGCGAGGTGAAGCAGCTCAAGAAGAAGCAGGACAACAAGCTGACCTTCGACGACCTGATCGCCACCTCGCCCGAGATGAAGCAGGTCTTCCGCCTGGGGGCGCGCGCCGCGCAGAGCGACATTCCCGTGCTGATCGAGGGCGAAAGCGGCGCCGGCAAGGAACTGATCGCCCGCGCGATCCAGGGCACCAGCGCCCGCAGCGGCAAGCCCTTCGTGACCGTGAACTGCGGCGCGATCCCGGAAAATCTGATCGAATCCATTCTGTTCGGCCATGAAAAGGGCAGCTTCACCGGCGCCTCCGACAAGCATCTGGGCAAGTTCCAGGAGGCCGACGGCGGCACCCTGTTCCTGGACGAGATCGGCGAACTGCGCCTGGACATGCAGGTCAAGCTGCTGCGCGCCCTGCAGGAAGGCGAAGTGGATCCGGTCGGCTCCAAGCGGCCGGTCAAGGTGGATGTCCGCATCATCGCCGCCACCAACCGCGACCTGGGCGCGATGGCGCGCGACGGCGGCTTCCGCGAAGACCTGTATTACCGCCTGAACGTGTTTCCCATGATGCTGCCGGCCCTGCGCGACCGCACCGGCGACATCGCCCCGCTGGCGCGCCATTTCATCGCCCGCTTCGCGGCCGAGGAAAACAAGCCGGTTTCGGGTCTGACCCCGCAGGCGTCGGCGCTGCTGGAAAAGTTCAACTGGCCGGGCAATGTGCGCCAGTTGGAGAACACCATCTTCCGCGCCGTGGTGCTGTGCGACGGCGCCCTGCTGGATGTGTGCGATTTCCCGCAGATCGCGACGGTGATGGGCGTGGACACGCTGGTGCGCCAGAACCATGCGCCGGTGCAGCCGGGAGGGCAGTCCGGCCTGACCGCCCCCGCCTTGCCGACGGGCAGCGCCTATGGCCTCAGCGTCACGGACGGCAGCGGCCATGTCCGCAAGTTCGAGGAGCTGGAATCGGAAATCATCCGTATGGCCATCGCCCGCTATGACGGCCATATGTCGGAAGTGGCCCGCCGCCTGGGCATCGGCCGCTCCACCCTCTATCGCAAGCTGAAGGAATTCGGCCTGGACCCCGACCTGGCGAACGAGCCCATGGCCAAGGTGGCGCAAGACACCGATTTGCCCATGGGCGCGCCGATGGGCGGCGACGGCATCCGCCGGACAGCTTAA
PROTEIN sequence
Length: 490
MQVVTAPGGGPALDLINGPRGEQITLMLLDLVMPDMGGLEVLAQLRPTNPDLPVIVLTAKGGIDSAVEAMRAGANDFLVKPASPERIAVSIRNQLKIGTLSGEVKQLKKKQDNKLTFDDLIATSPEMKQVFRLGARAAQSDIPVLIEGESGAGKELIARAIQGTSARSGKPFVTVNCGAIPENLIESILFGHEKGSFTGASDKHLGKFQEADGGTLFLDEIGELRLDMQVKLLRALQEGEVDPVGSKRPVKVDVRIIAATNRDLGAMARDGGFREDLYYRLNVFPMMLPALRDRTGDIAPLARHFIARFAAEENKPVSGLTPQASALLEKFNWPGNVRQLENTIFRAVVLCDGALLDVCDFPQIATVMGVDTLVRQNHAPVQPGGQSGLTAPALPTGSAYGLSVTDGSGHVRKFEELESEIIRMAIARYDGHMSEVARRLGIGRSTLYRKLKEFGLDPDLANEPMAKVAQDTDLPMGAPMGGDGIRRTA*