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SCNpilot_expt_1000_bf_scaffold_5276_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2298..2642)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 n=1 Tax=Sphingomonas sp. S17 RepID=F3X0I4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 113.0
  • Bit_score: 152
  • Evalue 2.30e-34
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 113.0
  • Bit_score: 152
  • Evalue 3.20e-34
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 110.0
  • Bit_score: 144
  • Evalue 2.60e-32

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 345
ATGACCAACGCTCTCTTCAAAAAGCGCCAGTCGCGCAACCGCCACCGTCTGGCCACCCACGGCAACCGTCCGCGCCTGTCGGTGTTCCGTTCCGGCAAGCACATCTACGCCCAGGTGATCGACGATGTGCAGGCCGTCACCCTGGCCTCCGCCTCGACCAACGAGAAGGACGCCAAGGGCAAGGGCTACAACGTCGAAGCCGCCGGCCAGGTCGGCAAGGCGATCGCCGAGCGCGCCAAGGCCGCCGGCGTCACCCAGGTCATGTTCGACCGTGGCGGCTACATTTATCATGGGCGCATCAAGGCGCTCGCTGACGCGGCGCGTGAAGCCGGTCTGGAATTCTAA
PROTEIN sequence
Length: 115
MTNALFKKRQSRNRHRLATHGNRPRLSVFRSGKHIYAQVIDDVQAVTLASASTNEKDAKGKGYNVEAAGQVGKAIAERAKAAGVTQVMFDRGGYIYHGRIKALADAAREAGLEF*