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SCNpilot_expt_1000_bf_scaffold_5276_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(2644..3177)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 177.0
  • Bit_score: 244
  • Evalue 2.20e-62
50S ribosomal protein L6 n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3HZT9_RHOVT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 177.0
  • Bit_score: 244
  • Evalue 6.90e-62
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 177.0
  • Bit_score: 244
  • Evalue 9.60e-62

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Taxonomy

Rhodomicrobium vannielii → Rhodomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCCCGTATTGGCAAGAAACCCGTCGCGCTCCCCAAGGGCGTCACCGCCTCGGTCGAGGGTCAGACCGTCAAGGTCAAGGGGCCCAAGGGCGAACTCAGCGTCACGCTGGTTCCGCAGGTGGCCGTGGCGCTGGGCGATGACGGCATCACCGTCACGCCCCGCAAGGAAATGGAACAGTCCGCCCAGATGTGGGGCCTGTCCCGCACCCAGGTGAACAATCTGGTGATCGGCGTCACCACCGGCTTCACGCAGAATCTGGAAATCCAGGGCGTCGGCTATCGCGCCGCGGTGCAGGGCAAGGTCCTGAACCTGCAGCTGGGCTTCAGCCATGACGTGCCCTATGCGATCCCGGACGGCATTTCGATCGTCACCGAAAAGCCGACCATGATCTCGGTGTCGGGCATGGACAAGCAGCTGGTCGGCCAGGTCGCCGCCGAGATCCGCTCCTGGCGTCCGCCGGAGCCCTATAAGGGCAAGGGCGTGCGCTACGAAGGCGAATATGTCCGCCGCAAGGAAGGCAAGAAGAAGTAA
PROTEIN sequence
Length: 178
MSRIGKKPVALPKGVTASVEGQTVKVKGPKGELSVTLVPQVAVALGDDGITVTPRKEMEQSAQMWGLSRTQVNNLVIGVTTGFTQNLEIQGVGYRAAVQGKVLNLQLGFSHDVPYAIPDGISIVTEKPTMISVSGMDKQLVGQVAAEIRSWRPPEPYKGKGVRYEGEYVRRKEGKKK*