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SCNpilot_expt_1000_bf_scaffold_7003_curated_1

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(3..542)

Top 3 Functional Annotations

Value Algorithm Source
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.2
  • Coverage: 180.0
  • Bit_score: 280
  • Evalue 2.10e-72
GDP-L-fucose synthase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WEX8_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 180.0
  • Bit_score: 273
  • Evalue 1.40e-70
NAD-dependent epimerase/dehydratase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 180.0
  • Bit_score: 270
  • Evalue 3.70e-70

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Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
GTGATCGAGGCGGCGCGGCACGGCGGGGTGGCCAAGCTGCTCTATCTGGGCTCAAGCTGCATCTATCCCAAATTCGCGCCCCAGCCGATCCCGGAGGATGCCCTGCTGAGCGGCGCGCTGGAGCCCACCCACGAAGCCTATGCCATCGCCAAGATCGCAGGCCTCAAGATGGCACAGGCCTATCGCCGCCAGCATGGCTGCGACTTCATCTCCGCCATGCCCCCCAACCTGTACGGCCCCGGCGACAATTTCGATCCCGTCACCAGCCATGTGCTGCCCGCGCTGATGCGCAAGACCCATGAGGCCAGGCTGCGGGGCGACGCCGTGCTCACCATCTGGGGCACCGGCACGCCGCGCCGCGAATTCCTGCATGTGGACGATTGCGCCGACGCGCTGGTCTTTCTGATGAAGACCTATTCCGGCGACGGCCATATCAATGTCGGCGCGGGCAAGGACACCACCATCCTGGAACTGACGCGGATGATGGCCGAAGTGACGGGCTTTGCGGGCGAGATCCGCACCGACCCCTCCAAACCCGAC
PROTEIN sequence
Length: 180
VIEAARHGGVAKLLYLGSSCIYPKFAPQPIPEDALLSGALEPTHEAYAIAKIAGLKMAQAYRRQHGCDFISAMPPNLYGPGDNFDPVTSHVLPALMRKTHEARLRGDAVLTIWGTGTPRREFLHVDDCADALVFLMKTYSGDGHINVGAGKDTTILELTRMMAEVTGFAGEIRTDPSKPD