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SCNpilot_expt_1000_bf_scaffold_9410_curated_5

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 1739..2884

Top 3 Functional Annotations

Value Algorithm Source
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 380.0
  • Bit_score: 586
  • Evalue 6.50e-165
  • rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTY2_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 380.0
  • Bit_score: 586
  • Evalue 2.10e-164
  • rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 380.0
  • Bit_score: 586
  • Evalue 2.90e-164

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Taxonomy

Parvibaculum lavamentivorans → Parvibaculum → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGAGCATCCGCGCTTATCGCGACATCCACCGCCGTCCATCGCGGCAGATCATGGTCGGCAAGGTGCCGGTCGGCGGCGACGCCCCGATCACGGTCCAGACCATGACCAACACCATCACCGGCGACGCCCGCGCCACCATCGATCAGATCCGCAAGATCGAGGAAGCCGGGGCGGACATCGTACGGGTCTCCTGCCCCGACGAGGACGCGACCAGGGCGATGAAGGCGATCACCACCGCCGTCGGCATTCCGGTGGTGGCCGACATCCATTTCCACTACAAGCGCGCCATCGAGGCGGCCCAGAACGGCGCCGCCTGCCTGCGGATCAATCCCGGCAATATCGGTTCGCCCGCCCGCGTGCGCGAAGTGGTGCAGGCCGCCAAGGATCACGGCTGTTCGATGCGGATCGGCGTCAATGCCGGTTCGCTGGAATCCGACCTGTTGGAAAAGTATGGCGAGCCGTGCCCGGAGGCGATGGTGGAAAGCGCCCTGAACCACGCCCGTATCCTGGATGACCTGGACTTCCGCGAATACAAGATTTCGGTGAAGGCGTCCGATCCCTTCCTGGCGGTGGCCGCCTATCAGGCGCTGTCCGAGGCGATCGACTGCCCCCTGCATGTCGGCATCACCGAGGCGGGCGGCATGATCGCGGGCACCGTCAAGTCGTCCATCGGCATGGGAATGCTGCTGTGGAGCGGCATCGGCGACACCATCCGCGTCTCGCTCTCGGCCGATCCGGTGGAGGAAGTGCGGGTGGGCTTCGACATCCTCAAGACTCTGAATCTGCGCCATCGCGGCGTGAACATCATTTCCTGCCCCTCCTGCGCCCGCCAGGGCTTCAACGTCATCGACACCGTCAAGACCCTGGAAGACCGGCTCAAGCACATCGCCACCCCCATGTCGCTGTCGATCATCGGCTGCGTGGTGAACGGGCCGGGCGAGGCGCGCGAGACCGATATCGGCTTCACCGGCGGCGGCGCGGGCAAGGGCCATGGCCAGGTCTATCTCAACGGCGAGCCCCGTTACCGCATCGAGAATCCCGACCTGGTGGAGCACATCGTCAAGCTGTGCGAGGACAAGGCCGCCGAGATCGAGGCCCAGCGCAACGGCGCCGGAAGCTCCGAGCCGCTGGAAGCCGCGCAGTAG
PROTEIN sequence
Length: 382
MSIRAYRDIHRRPSRQIMVGKVPVGGDAPITVQTMTNTITGDARATIDQIRKIEEAGADIVRVSCPDEDATRAMKAITTAVGIPVVADIHFHYKRAIEAAQNGAACLRINPGNIGSPARVREVVQAAKDHGCSMRIGVNAGSLESDLLEKYGEPCPEAMVESALNHARILDDLDFREYKISVKASDPFLAVAAYQALSEAIDCPLHVGITEAGGMIAGTVKSSIGMGMLLWSGIGDTIRVSLSADPVEEVRVGFDILKTLNLRHRGVNIISCPSCARQGFNVIDTVKTLEDRLKHIATPMSLSIIGCVVNGPGEARETDIGFTGGGAGKGHGQVYLNGEPRYRIENPDLVEHIVKLCEDKAAEIEAQRNGAGSSEPLEAAQ*