ggKbase home page

SCNpilot_expt_1000_bf_scaffold_9410_curated_6

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: 2995..4077

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V0G0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 358.0
  • Bit_score: 465
  • Evalue 5.00e-128
  • rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 358.0
  • Bit_score: 465
  • Evalue 7.10e-128
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 similarity KEGG
DB: KEGG
  • Identity: 63.6
  • Coverage: 357.0
  • Bit_score: 463
  • Evalue 7.80e-128
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1083
ATGATCCCCGCCGCCAAGCTGGAACGACTGCTGGACCGTTTCTCGGCCATCGAGGCCGAGATGGCCTCGGGCGTGGCCGGGGACGCCTTCGTCAAGCTGTCGCGCGAACATGCCGAACTGGCGCCGGTGATCGAGACGGTACGGGCCTATCGCACCGCCCAGACGGGCTTTGCCGATGCCGAGGCGCTGATCGCCGATCCGGCCACCGACAGCGACATGCGCGCCATGGCCGAGGAGGAGCGCGCCGACCTCAAGCAGCATCTCGAAAAGCTGGATCATGCCCTGCGCATCGCGCTGCTGCCGCGTGACGCCGCCGACGATTCCAGCGCCATCGTGGAAATCCGCGCCGGCACCGGCGGCGACGAGGCCGCCCTGTTCGCGGGCGACCTTTTGGGCATGTACCAGCGCTATTGCGGCCTGCAGGGCTGGAAGACCGAGGTTCTGTCCCTGTCGGAAAGCGACCTGGGCGGTTTCAAGGACGCCACCCTGGAGGTGGAAGGCCGGGGCGTCTATGCCAAGCTGAAATTCGAAAGTGGCGTCCATCGCGTCCAGCGTGTGCCCGCCACCGAGACGCAGGGGCGCATCCACACCTCTGCCGCCACCGTGGCGGTGCTGCCGGAGGCCCAGGATGTGGACATCGTGATCCACGACAAGGACTTGCGGATCGACACCTATCGCGCCCAGGGCGCGGGCGGCCAGCATGTCAACAAGACCGACAGCGCCGTGCGCATCACCCACATTCCCACCGGCACCGTGGTGGCGATGCAGGAGGAGAAATCCCAGCACAAGAACAAGGCCAAGGCGATGACCTTGCTCAAGGCCAAGATCTTCGATGCCGAGCGCCGCCGCGTCGATGCCGAGCGCGCCAGCGAGCGCAAGTCGCTGGTGGGATCGGGCGACCGCAGCGAGCGCATCCGCACCTATAACTTCCCCCAAGGCCGCGTCACCGATCACCGCATCAACCTGACGCTCTACAACCTGTCGCGGATCATCACCGGCGACGAGTTGGGCGAGATCGTCGATGCGCTGGTGGCCCAGGACCAGGCCGACCGCCTGGCCGAATACGAAGCCTCCGAAGCGTGA
PROTEIN sequence
Length: 361
MIPAAKLERLLDRFSAIEAEMASGVAGDAFVKLSREHAELAPVIETVRAYRTAQTGFADAEALIADPATDSDMRAMAEEERADLKQHLEKLDHALRIALLPRDAADDSSAIVEIRAGTGGDEAALFAGDLLGMYQRYCGLQGWKTEVLSLSESDLGGFKDATLEVEGRGVYAKLKFESGVHRVQRVPATETQGRIHTSAATVAVLPEAQDVDIVIHDKDLRIDTYRAQGAGGQHVNKTDSAVRITHIPTGTVVAMQEEKSQHKNKAKAMTLLKAKIFDAERRRVDAERASERKSLVGSGDRSERIRTYNFPQGRVTDHRINLTLYNLSRIITGDELGEIVDALVAQDQADRLAEYEASEA*