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SCNpilot_expt_1000_bf_scaffold_6987_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6987_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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79..246
DNA (168bp) protein (56aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETX6_9RHIZ
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EYR78466.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K07046
SCNpilot_expt_1000_bf_scaffold_6987_curated_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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673..1554
DNA (882bp) protein (294aa)
amino acid deaminase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003719BD5 rbh
hypothetical protein; K01753 D-serine dehydratase [EC:4.3.1.18] rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS61129.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_expt_1000_bf_scaffold_6987_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1593..1937
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D161_9RHIZ
Putative translation initiation inhibitor, YjgF family {ECO:0000313|EMBL:EYR78464.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
endoribonuclease L-PSP
SCNpilot_expt_1000_bf_scaffold_6987_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1969..2982
DNA (1014bp) protein (338aa)
Putative deacylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CS55_9RHIZ rbh
Putative deacylase {ECO:0000313|EMBL:EYR78463.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K06987 rbh
SCNpilot_expt_1000_bf_scaffold_6987_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2972..4159)
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CC89_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR78462.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
SCNpilot_expt_1000_bf_scaffold_6987_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4532..5416
DNA (885bp) protein (295aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
formyltetrahydrofolate deformylase n=1 Tax=Rhizobium giardinii RepID=UPI0003655D65 rbh
purU1; formyltetrahydrofolate deformylase; K01433 formyltetrahydrofolate deformylase [EC:3.5.1.10] rbh
SCNpilot_expt_1000_bf_scaffold_6987_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5584..6687)
DNA (1104bp) protein (368aa)
Putative oxidoreductase OrdL n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWM0_9RHIZ rbh
Putative oxidoreductase OrdL {ECO:0000313|EMBL:EYR78977.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR78977.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
FAD dependent oxidoreductase rbh
Displaying 7 items

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