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SCNpilot_expt_1000_bf_scaffold_15911_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15911_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..426)
DNA (426bp) protein (142aa)
Putative transmembrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVY4_9RHIZ
Putative transmembrane protein {ECO:0000313|EMBL:EYR79839.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_15911_curated_2
unknown

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495..695
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15911_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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727..1194
DNA (468bp) protein (156aa)
Putative peroxiredoxin Bcp {ECO:0000313|EMBL:EYR79838.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EYR79838.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
bcp; bacterioferritin comigratory protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Bacterioferritin comigratory protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JVS1_AGRVS
SCNpilot_expt_1000_bf_scaffold_15911_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1217..2044
DNA (828bp) protein (276aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR79837.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein rbh
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PUU6_9RHIZ rbh
SCNpilot_expt_1000_bf_scaffold_15911_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2143..3198
DNA (1056bp) protein (352aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDH1_9RHIZ rbh
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EYR79836.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transmembrane peptidase rbh
SCNpilot_expt_1000_bf_scaffold_15911_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3168..3398
DNA (231bp) protein (77aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CDH1_9RHIZ
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EYR79836.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
metalloendopeptidase
SCNpilot_expt_1000_bf_scaffold_15911_curated_7
RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3450..4265)
DNA (816bp) protein (272aa)
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
id=12551892 bin=BDI tax=BDI organism_group=Betaproteobacteria
SCNpilot_expt_1000_bf_scaffold_15911_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5092..5394
DNA (303bp) protein (101aa)
MutT-like protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2F4_9RHIZ
MutT-like protein {ECO:0000313|EMBL:EYR79834.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
NUDIX hydrolase
Displaying 8 items

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