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SCNpilot_expt_1000_bf_scaffold_8138_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8138_curated_1
unknown

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comp(1..222)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8138_curated_2
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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688..987
DNA (300bp) protein (100aa)
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
Periplasmic binding protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJF9_MESCW
Periplasmic binding protein {ECO:0000313|EMBL:ADV13721.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_8138_curated_3
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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990..1994
DNA (1005bp) protein (335aa)
transport system permease; K02015 iron complex transport system permease protein rbh
Transport system permease protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJF8_MESCW rbh
Transport system permease protein {ECO:0000313|EMBL:ADV13720.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_expt_1000_bf_scaffold_8138_curated_4
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2335..3363)
DNA (1029bp) protein (343aa)
Putative membrane protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RIW1_9RHIZ
Putative membrane protein {ECO:0000313|EMBL:ESR25264.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
high-affinity nickel-transport family protein
SCNpilot_expt_1000_bf_scaffold_8138_curated_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3360..4016)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000380B7E4
PF06226 family protein {ECO:0000313|EMBL:KCV59750.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8138_curated_6
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4139..4798
DNA (660bp) protein (220aa)
hypothetical protein rbh
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q285_RHIE6 rbh
Hypothetical conserved protein {ECO:0000313|EMBL:ACE93791.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCNpilot_expt_1000_bf_scaffold_8138_curated_7
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5060..5575
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002EA74E7
GcrA cell cycle regulator {ECO:0000313|EMBL:KFG70056.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
GcrA cell cycle regulator; K13583 GcrA cell cycle regulator
SCNpilot_expt_1000_bf_scaffold_8138_curated_8
Brucella suis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5641..5802)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000367B5AE
ABC-type uncharacterized transport system, periplasmic component
Putative uncharacterized protein {ECO:0000313|EMBL:EEY27355.1}; TaxID=520489 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella suis bv. 5 str. 513.;"
SCNpilot_expt_1000_bf_scaffold_8138_curated_9
unknown

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comp(5833..6060)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8138_curated_10
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6208..6708)
DNA (501bp) protein (167aa)
ABC transporter n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MEE0_9RHIZ
ABC transporter {ECO:0000313|EMBL:EKF20536.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
SCNpilot_expt_1000_bf_scaffold_8138_curated_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7004..7789)
DNA (786bp) protein (262aa)
Siderophore-interacting protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MIK1_9RHIZ rbh
Siderophore-interacting protein {ECO:0000313|EMBL:EKF20535.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
siderophore-interacting protein
SCNpilot_expt_1000_bf_scaffold_8138_curated_12
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7786..8088)
DNA (303bp) protein (101aa)
Iron-hydroxamate transporter permease subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LRW5_9RHIZ
Iron-hydroxamate transporter permease subunit {ECO:0000313|EMBL:EKF20534.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
fhuB; Iron(3+)-hydroxamate import system permease protein fhuB; K02015 iron complex transport system permease protein
SCNpilot_expt_1000_bf_scaffold_8138_curated_13
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8079..8882)
DNA (804bp) protein (268aa)
Iron-hydroxamate transporter permease subunit n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LRW5_9RHIZ rbh
Iron-hydroxamate transporter permease subunit {ECO:0000313|EMBL:EKF20534.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Ferrichrome ABC transporter, permease protein FhuB
SCNpilot_expt_1000_bf_scaffold_8138_curated_14
unknown

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9103..9957
DNA (855bp) protein (285aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_8138_curated_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9791..10408)
DNA (618bp) protein (206aa)
Periplasmic binding protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N8V0_9RHIZ rbh
Periplasmic binding protein {ECO:0000313|EMBL:EKF20533.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
fhuD; iron(III)-siderophore-binding periplasmic protein
Displaying 15 items

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