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SCNpilot_expt_1000_bf_scaffold_4003_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(94..717)

Top 3 Functional Annotations

Value Algorithm Source
Protein GrpE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRQ7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 207.0
  • Bit_score: 346
  • Evalue 2.60e-92
  • rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 207.0
  • Bit_score: 346
  • Evalue 3.60e-92
heat shock protein GrpE; K03687 molecular chaperone GrpE similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 209.0
  • Bit_score: 304
  • Evalue 2.10e-80
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGACCGACGAGACCAAGAAACACGGACCTGACGAAGCGGTCGAAAACAACGTCGCCGCGGAAGCATTCGCCCCGCAGGAGGCTGCCGCCGGCGCGGACGCTCCGGCAGAGCCCGACCCGGTCGAGCTTCTGAAGGCCGAGAACGCCGAGCTCAGGGACAGGTACCTGCGCCTGGCCGCCGAGATGGACAACCTGCGTCGTCGCACCGAGCGCGACGTGAAGGACGCCAAGTCCTATTCCGTCGCGGGCTTTGCGCGCGACATGCTGGCCGTCTCCGACAACCTGCGCCGCGCGCTCGACGCCATTCCGCCCGATGCCCTTGCCGGGAACGATACGGGCCTGAAGGCGCTGGCGGAAGGCGTCGAGATGACCGAGCGCTCCATGCTGGCCGCGCTCGAGCGCCACGGCGTGCGCAAGCTCGACCCGATCGGCGAGAAATTCGACCCGAACTTCCACCAGGCGATGTTCGAGGTGCCGAACCCCGATGTCGCCAGCAACACGGTCGTCCAGGTCGTGCAGGCCGGCTACGTCATCGGCGAGCGCGTCCTGCGCCCGGCCATGGTCGGCGTCTCCAAGGGCGGCCCGAAGGCTCCCGCCGGCGAGGCGAACGCTGCGCAGGCCTGA
PROTEIN sequence
Length: 208
MTDETKKHGPDEAVENNVAAEAFAPQEAAAGADAPAEPDPVELLKAENAELRDRYLRLAAEMDNLRRRTERDVKDAKSYSVAGFARDMLAVSDNLRRALDAIPPDALAGNDTGLKALAEGVEMTERSMLAALERHGVRKLDPIGEKFDPNFHQAMFEVPNPDVASNTVVQVVQAGYVIGERVLRPAMVGVSKGGPKAPAGEANAAQA*