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SCNpilot_expt_1000_bf_scaffold_4003_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5259..6818)

Top 3 Functional Annotations

Value Algorithm Source
Chromosomal replication initiator protein DnaA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D361_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 519.0
  • Bit_score: 948
  • Evalue 3.70e-273
  • rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 519.0
  • Bit_score: 948
  • Evalue 5.20e-273
chromosomal replication initiator protein dnaA; K02313 chromosomal replication initiator protein similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 519.0
  • Bit_score: 820
  • Evalue 2.80e-235
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGCAGATGAATACGGCCAGGACGGCTGGTGCATTCGCAAATGGGGAAAATACAAGACAGGCGCTCCCGCAAGAAGGGGCACAAGAGGCGGCGGGGGTTCCATCCGATATGAAGCATGACGCGCTTTTCGAACGGGTCAGTGCGCGCCTGAAGGCGCAGGTCGGTCCGGACGTCTTCGCGAGCTGGTTCGGTCGTCTGAAGGTCCACTCGGTCTCCAAGAGCGTCGTGCGCCTTTCGGTGCCCACGACCTTCCTGAAATCCTGGATCAACAACCGGTATCTCGATCTCATCACCAGTCTCTTCCAGCAGGAGGATGCCGAGATCCTCAAGGTGGAGATCCTGGTGCGCACCGCCACCCGGGGCGTTCGCGCCGGCGCCGCCGACGAAGCCGCCGTCGCCGAGCAGCCCGCCCCGCAGGCCCAGCCGCGCCGCGCCTCCGCCGGTCCGCAGCCCGTGGCCAATGCCGCCGCATCGGTGGCCGCCTCGGCCCAGCCGCGCGCCCAGCATTCGGGCCCGCTCTTCGGCTCGCCGCTCGACCAGCGCTACACGTTCGATGCCTTCGTCGAGGGCACGTCGAACCGCGTCGCCCTTGCCGCCGCCCGCACCATCGCCGAAGCCGGTGCCGGTGCCGTGCGCTTCAACCCGCTCTTCGTCCATTCCAGCGTCGGGCTCGGCAAGACGCATCTTCTCCAGGCGATCGCGCTTGGGGCCCTTTCGAGCGCCCGCAACCCGCGCGTCGTCTACCTGACGGCGGAATATTTCATGTGGCGCTTCGCCACCGCGATCCGCGACAACGATGCGCTCTCCCTCAAGGAAACGCTGCGCAACATCGATCTCCTGATCATCGACGACATGCAGTTCCTGCAGGGCAACTCGATCCAGAACGAGTTCTGCCACCTGCTGAACATGCTGCTCGATTCCGCACGGCAGGTCGTGGTCGCCGCCGACCGCGCACCCTGGGAGCTGGAATCGCTCGATCCGCGCGTCCGCTCGCGCCTGCAGGGCGGTGTCGCCATCGAGATGGAGGCGCCGGACTACGAGATGCGCCTCGAGATCCTGAAGCGCCGCCTTGCCGTCGCGCAGCAGGAAGACGCCTCGCTCGACATTCCGGTCGAGATCCTCAGCCATGTCGCCCGCAACATCACGGCAAGCGGCCGCGAGCTGGAGGGGGCCTTCAACCAGTTGCTCTTCCGCCGCTCCTTCGAGCCGAACCTGACGATCGAGCGCGTCGACGAACTGCTCGGCCATCTGGTCGCCGCCGGCGAGCCGCGCCGCGTGCGCATCGAGGACATCCAGCGCGTCGTCGCCAAGCACTACAACGTTTCGCGCCAGGAGCTGGTCTCGAACCGCCGCACGCGCGTCATCGTCAAGCCGCGCCAGATCGCCATGTACCTGTCGAAGACCCTGACGCCGCGCTCCTTCCCGGAAATCGGCCGCCGCTTCGGCGGACGCGACCACACGACCGTGCTGCATGCCGTGCGCAAGATCGAGGAGTTGATCTCGGGTGACACCAAGCTCAGCCACGAGATCGAGCTCTTGAAACGGCTGATCAACGAATAA
PROTEIN sequence
Length: 520
MQMNTARTAGAFANGENTRQALPQEGAQEAAGVPSDMKHDALFERVSARLKAQVGPDVFASWFGRLKVHSVSKSVVRLSVPTTFLKSWINNRYLDLITSLFQQEDAEILKVEILVRTATRGVRAGAADEAAVAEQPAPQAQPRRASAGPQPVANAAASVAASAQPRAQHSGPLFGSPLDQRYTFDAFVEGTSNRVALAAARTIAEAGAGAVRFNPLFVHSSVGLGKTHLLQAIALGALSSARNPRVVYLTAEYFMWRFATAIRDNDALSLKETLRNIDLLIIDDMQFLQGNSIQNEFCHLLNMLLDSARQVVVAADRAPWELESLDPRVRSRLQGGVAIEMEAPDYEMRLEILKRRLAVAQQEDASLDIPVEILSHVARNITASGRELEGAFNQLLFRRSFEPNLTIERVDELLGHLVAAGEPRRVRIEDIQRVVAKHYNVSRQELVSNRRTRVIVKPRQIAMYLSKTLTPRSFPEIGRRFGGRDHTTVLHAVRKIEELISGDTKLSHEIELLKRLINE*