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SCNpilot_expt_1000_bf_scaffold_4003_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 10895..12469

Top 3 Functional Annotations

Value Algorithm Source
Putative ubiquinone biosynthesis protein UbiB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CU38_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 524.0
  • Bit_score: 965
  • Evalue 1.70e-278
  • rbh
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 524.0
  • Bit_score: 965
  • Evalue 2.40e-278
2-polyprenylphenol 6-hydroxylase; K03688 ubiquinone biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 525.0
  • Bit_score: 823
  • Evalue 4.30e-236
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1575
ATGAGCGTCATCGGCGCCTATCTTCGCCTCGCCCGCGTGGGCTGGGTCCTCGTGCGCGAGGGCGTGGTCTCCGCGCTGCCGACCGAGGGCATGCCGACGCTTGCCCGCACCGCCCATGCCTTTGCCGGCCTCTTCGAGCGGCGCAAGGCCGCAAAGGGCGGGCGAGGCGACAACCTTGCCCGCGCCATCGAGCGGCTCGGCCCCTCCTATGTGAAGATGGGCCAGTTCCTGGCGACCCGTCCCGACGTCGTCGGCGCGGAGATCGCCGTCGAGCTTTCGGCCCTGCAGGACCGCATGGCGACCTTCCCCAAGGAAGCGGCCGTCGCGACGGTGGAGGGCTCGCTCGGCCGGCCGCTCGGCGATCTCTATGTGAATTTCGGCGATCCGATCGCCGCCGCCTCCATCGCCCAGGTCCATCCCGCGACAGTGCGCGACGCGAATGGCGAGCGGAAGGTCGCGGTGAAGGTCATCCGTCCCGGCGTGCGCCAGCGTTTCGCCCACGACCTCGAAGCCATGTATGCGGCCTCGCGCCTTCAGGAAAAGATCCTGCCCAATACGCGACGGCTCAAGCCCGTCGAGGTGACGCGGACGCTGGAGCAGACGACCAAGGTCGAGATGGACCTCCGGCTGGAGGCCGCCGCGCTTTCCGAACTCGGCGAGAACACCAAGGACGATCCGGGCTTCCGCGTGCCGACGGTCGACTGGGAGCGCACCGGCCGCGACGTCGTCACCATGGAATGGATCGACGGCATCAAGATGTCCGACGTCGAGGGGCTGCGCGCCGCCGGCCACGACCTCGACAGGCTGGCGGACACGCTGATCCAGTCCTTCCTGCGCCACACGCTGCGCGACGGCTTCTTCCATGCCGACATGCACCAGGGCAATCTCTTCGTCGATCCCGAGGGCGTCATCGTCGCTGTCGACATGGGCATCGTCGGGCGGCTCGGCGGGAAGGAGCGCCGCTTCCTCGCGGAAATCCTCTACGGCTTCATCACGCGCGACTACCAGCGCGTCGCCGACGTGCATTTCGAGGCGGGCTACGTGCCCGCGCATCACGACACGGCGAGCTTCGCGCAGGCGATCCGCGCCATCGGCGAGCCGATCCACGGCCAGCCGGCCGAAACCATTTCCATGGCCAAGCTCCTGACACTGCTCTTCGAGGTGACGGAACTCTTCGACATGGAGACCCGCACCGAACTGGTCATGCTGCAGAAGACCATGGTGGTGGTGGAGGGCGTGTCGCGCACGCTGAACCCGCGCTTCAACATGTGGAAGTCTTCCGAGGGGGTCGTCGGCGACTGGATCCGCGACAATCTCGGCCCCAAGCGCCTGCTGGCGGACCTGCGCGAAGGCGCACACGCGGCCCTCAGGCTGGCGGAAGCGGCGCCCGAGATCGCCGCCAAGGCGGAGAAGTTCTCGCAGGACCTCACCGCCATGGCCGAGAAGGGCCTGCGCTTCGATGCGGAGACGGCGGAAGCCATCGGCCGCTCCGAGGCGCGGCACAGCCGCTCCGGCCGTCTCGCGCTCTGGGTGATCGCCGCCACGCTGATCTACATCGCCTGGAAGCTCAGCTAA
PROTEIN sequence
Length: 525
MSVIGAYLRLARVGWVLVREGVVSALPTEGMPTLARTAHAFAGLFERRKAAKGGRGDNLARAIERLGPSYVKMGQFLATRPDVVGAEIAVELSALQDRMATFPKEAAVATVEGSLGRPLGDLYVNFGDPIAAASIAQVHPATVRDANGERKVAVKVIRPGVRQRFAHDLEAMYAASRLQEKILPNTRRLKPVEVTRTLEQTTKVEMDLRLEAAALSELGENTKDDPGFRVPTVDWERTGRDVVTMEWIDGIKMSDVEGLRAAGHDLDRLADTLIQSFLRHTLRDGFFHADMHQGNLFVDPEGVIVAVDMGIVGRLGGKERRFLAEILYGFITRDYQRVADVHFEAGYVPAHHDTASFAQAIRAIGEPIHGQPAETISMAKLLTLLFEVTELFDMETRTELVMLQKTMVVVEGVSRTLNPRFNMWKSSEGVVGDWIRDNLGPKRLLADLREGAHAALRLAEAAPEIAAKAEKFSQDLTAMAEKGLRFDAETAEAIGRSEARHSRSGRLALWVIAATLIYIAWKLS*