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SCNpilot_expt_1000_bf_scaffold_6778_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..360

Top 3 Functional Annotations

Value Algorithm Source
Response regulator receiver protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2A1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 233
  • Evalue 1.40e-58
Response regulator receiver protein {ECO:0000313|EMBL:EYR80504.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 119.0
  • Bit_score: 233
  • Evalue 2.00e-58
two-component response regulator protein; K13589 two-component system, cell cycle response regulator CpdR similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 119.0
  • Bit_score: 230
  • Evalue 3.70e-58

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ACCCCCAAGATTCTCCTCGCCGAAGACGACAACGACATGCGACGCTTCCTCGTGAAGGCGCTCGAAAAGGCGGGCTACCAGGTGCTGTCCTACGACAACGGCGCCAGCGCATACGACCGGCTGCGCGAAGAACCCTTCTCGCTGCTGCTTACCGACATCGTGATGCCGGAGATGGACGGCATCGAGCTGGCGCGCCGCGCCACCGAGCTCGATCCCGACCTCAAGGTCATGTTCATCACGGGTTTTGCCGCCGTGGCGCTGAACCCGGATTCCAAGGCTCCGAAGGACGCAAAGGTCCTGTCCAAGCCCTTCCACCTGCGCGATCTCGTCGATGAGGTCAACAAGATGCTGGCCGCCTAA
PROTEIN sequence
Length: 120
TPKILLAEDDNDMRRFLVKALEKAGYQVLSYDNGASAYDRLREEPFSLLLTDIVMPEMDGIELARRATELDPDLKVMFITGFAAVALNPDSKAPKDAKVLSKPFHLRDLVDEVNKMLAA*