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SCNpilot_expt_1000_bf_scaffold_6778_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(589..1371)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI000374CA1A similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 256.0
  • Bit_score: 415
  • Evalue 4.30e-113
  • rbh
Phage integrase family protein {ECO:0000313|EMBL:CDN94817.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.9
  • Coverage: 257.0
  • Bit_score: 373
  • Evalue 2.60e-100
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 253.0
  • Bit_score: 250
  • Evalue 5.80e-64

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGGGCGGGGAAGACGGCCGCCGGCCGGTTACGCAAGGCACCGCTCGGCGCGAGTTGGAAACCCTGCAATCGGCACTCGGCTTCGCCTTCAAGGAAAAGAAGCTCATTCTCCCCGTTCTGGTCACGTTGCCTGACAAGGCCCCGGCGCGGGAGCGCTGGCTGGAGCGATCGGAGGCGGCGCGGCTTTTGGCGGCCGCCTTGGGCATCGTTCCGACCGCTTGTGATATAGCAAGCCGCAAGCCGGTAAAATGGGGTCGGATGTTCCGGCCCACCTATCATGTGGCGCGTTTCATTCTGATTGCGCTCTATACTGGCACACGGCATGAAGCCATCTTGGCGCTGCGCTGGGGCGTTAATTCAAGCGGCGGTTGGTTCGACCTGGAGCGCGGCATCCTCTATCGACGCGGGCAGGGCCAGCGGCAGACGAACAAGCGACGGCCTCCCGTGCCCATCCCCGAAAATCTGGTGCCGCACGTTCACCGCTGGAGAAAGCTGACGGCTATCGGGCCGGTCGAGTATCACGGCCGACTCATCAAGAAAGAGCGAAAAGCTTTTGATCGCGCCAGGGATCTTGCCGGTCTCGGCGACGATGTGACGCCGCATATCCTGCGGCATACCTGTGCGACGTGGATGCTTCAGCGTGGCGTGCCGATTTGGGAGGTCGCAGGCTTCCTCGGCGCTTCCGAGAAAGTGATTCGCGATACCTATGGTCATCACTCGCCCAAGCACCTAGAGGCCGCCAAGAGGCGGTTTAATGGGCAAAGCTTGGGCAATGGATTTTAA
PROTEIN sequence
Length: 261
MGGEDGRRPVTQGTARRELETLQSALGFAFKEKKLILPVLVTLPDKAPARERWLERSEAARLLAAALGIVPTACDIASRKPVKWGRMFRPTYHVARFILIALYTGTRHEAILALRWGVNSSGGWFDLERGILYRRGQGQRQTNKRRPPVPIPENLVPHVHRWRKLTAIGPVEYHGRLIKKERKAFDRARDLAGLGDDVTPHILRHTCATWMLQRGVPIWEVAGFLGASEKVIRDTYGHHSPKHLEAAKRRFNGQSLGNGF*