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SCNpilot_expt_1000_bf_scaffold_8148_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5114..5878)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003776CFB similarity UNIREF
DB: UNIREF100
  • Identity: 40.1
  • Coverage: 242.0
  • Bit_score: 157
  • Evalue 1.60e-35
Uncharacterized protein {ECO:0000313|EMBL:ENA32717.1}; TaxID=1203578 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. HPB0071.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 229.0
  • Bit_score: 146
  • Evalue 5.10e-32
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 235.0
  • Bit_score: 145
  • Evalue 2.60e-32

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Taxonomy

Pseudomonas sp. HPB0071 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
ATGACAGCGCAGTATGTAGCGGTTTTCATCGATGCGGAGAATGTGTCTGTCTCGGCCGCGGCCGCCATCCTCGAAGAAGCCGCCCGGCACGGGACCGTGCGGGAGCGCCGGCTTTACGGCGATTTCAACCGATGCCCGCAGCTTTCCACCTGGCTGGACATCGCGCCCCGGCACGCGCTGACGCCATGCCAGACGGCCGGCGGCGCGGTCGGGAAGAACGGTGCGGATATTGCGCTTGTCATCGATGCCGTCGCTATGCTCTGCCGCAACGAAGCGGACGTCTTCTGCATCGCGACAAGCGACGGGGATTTCACGCAACTGGCAATCCGCATCCGCCAGGAGGGAAAGACCGTCATCGGTCTCGGCCGTGAACGGGCCTCCCTCCGTTTCAGGGAGGCCTGCGACGCCTTCGTCGCGACCGAGGTCGTCAAGGCGCCACCACCGGCGGTGACCGCCGGGAAAAAGCCGTCCCCTGCCGCCAAGGCGCCGACGCCGCGCAAGCTGGAGGCGGATCTTCTGCACAGGGCCTTCGCGGCCGCGCCGCGGGTGGACGGAGAATGGGTGAGGCTGCAGGATATGCTGAATGCGTTGCAGGCATGCCGGCCGGGCTTTAAGGTCAAATCCTACGGGCATAGCCAGTTGTGCAAGCTTCTGGCCTTCTCCGAGGCCGAACTGGCCGACAAGAACCGGAAGGTGCGCATCCGCAAGCCTGCTCTCAAGGCCGTGGTGGACAACCGGCAGCCTTACATTGCTGCTGCGGGCTGA
PROTEIN sequence
Length: 255
MTAQYVAVFIDAENVSVSAAAAILEEAARHGTVRERRLYGDFNRCPQLSTWLDIAPRHALTPCQTAGGAVGKNGADIALVIDAVAMLCRNEADVFCIATSDGDFTQLAIRIRQEGKTVIGLGRERASLRFREACDAFVATEVVKAPPPAVTAGKKPSPAAKAPTPRKLEADLLHRAFAAAPRVDGEWVRLQDMLNALQACRPGFKVKSYGHSQLCKLLAFSEAELADKNRKVRIRKPALKAVVDNRQPYIAAAG*