ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8846_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(12412..12882)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4H1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 156.0
  • Bit_score: 220
  • Evalue 1.20e-54
Uncharacterized protein {ECO:0000313|EMBL:GAD47966.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 156.0
  • Bit_score: 220
  • Evalue 1.70e-54
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 153.0
  • Bit_score: 200
  • Evalue 5.40e-49

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 471
ATGCGCTTCGCCACGATCCTCCTGCTTCTCGCCGGCATCGCCGCCTTTCCTGCCCCTGCGGCCGCGCAGGATCGGGAGACGCCTTATTGGGCCTCGCTCAGGGCGACCGAGGTCAACATGCGCGTCGGGCCGAGCGAGGATTATGCGATCGAGTGGGTCTATCGCCAGCCTCACCTGCCGGTAAAGGTGCTACGCATCAAGGAAGGCTGGCGGCTGGTCCGCGATCCCGACGGGGCGCAGGGCTGGATCGTCGCCAGGCTGCTGAGCCCCGAGCGCACCGCGCTGGTGGTGGGAGAAGGATTGACGCCAATGCGCGAAACGGCTGCCGAAAGCGGGCGCCTGCTGTGGAACGTGGAGCCGGGCGTCGTCGGCATGCTCGGCGATTGCGAGGCGGGCTGGTGCGAATTCGATGTGGCGGGCCGCAAGGGGTTCGTGCGCCAGACCCGGCTGTGGGGCCCGGGGGAGCCGTAG
PROTEIN sequence
Length: 157
MRFATILLLLAGIAAFPAPAAAQDRETPYWASLRATEVNMRVGPSEDYAIEWVYRQPHLPVKVLRIKEGWRLVRDPDGAQGWIVARLLSPERTALVVGEGLTPMRETAAESGRLLWNVEPGVVGMLGDCEAGWCEFDVAGRKGFVRQTRLWGPGEP*