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SCNpilot_expt_1000_bf_scaffold_2438_curated_15

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 13746..14054

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, GntR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D294_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 102.0
  • Bit_score: 201
  • Evalue 5.00e-49
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:EYR77780.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 102.0
  • Bit_score: 201
  • Evalue 7.10e-49
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.2
  • Coverage: 101.0
  • Bit_score: 160
  • Evalue 4.10e-37

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGCCGCTCGCCATCGAGCGCGCCTGCATCTCCGCCGAGTTCCTGCCCGACCCCATGCAGGTGCAGGGCTCGCTCTACGCCGCGCTGGAAAAGCGCGGTTGCCGGCCGGTGCGCGCCGTGCAGCGCATCTCCGCCTACAACATGAAGGACCCGGACGCCTCGATGCTCGGCGTGCCGCCCGGCTCCGCGGGCCTTTCCATCGAGCGCGTCTCCTACCTGCGCACCGGCCGGGTGGTCGAGTTCACCCGCTCCATCTACCGCGGCGACGCCTACGACTTCGTCGCCGAACTGACACTGTCCGAGACGTGA
PROTEIN sequence
Length: 103
MPLAIERACISAEFLPDPMQVQGSLYAALEKRGCRPVRAVQRISAYNMKDPDASMLGVPPGSAGLSIERVSYLRTGRVVEFTRSIYRGDAYDFVAELTLSET*