ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5073_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5655..6122

Top 3 Functional Annotations

Value Algorithm Source
Tax=RBG_16_Planctomycetes_55_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.8
  • Coverage: 142.0
  • Bit_score: 123
  • Evalue 3.70e-25
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CAZ4_MYXFH id=5224930 bin=16ft_combo_ws3_JS1 species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 154.0
  • Bit_score: 99
  • Evalue 4.10e-18

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Planctomycetes_55_9_curated → Phycisphaerae → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 468
GTGGCGAAGACGAAACGCAGGTCGACCGGCACCTCGCGTTCGGAGCCCACCGGCCGGACCTTGCGATCCTCCAGTACGCGCAGCAGCTTGCTTTGCGTGGCCGGCGGCATCTCGCTGATCTCGTCGAGGAACAGCGTGCCGCCCTGCGCATGCAGGAACAGGCCCTCGCGCGCCCGCTCGGCCCCCGTAAAGGCCCCCTTCAGGTGGCCGAACAGCTCGCTTTCGATCATGTCGGGCGGGATCGCGCCGCAATTGACGGGAACGAAGGGTTTTTCCGCCCGGTCGGAGAGCGCATGCAGCGAGCGCGCCGCCACCTCCTTGCCGGTCCCGGACTGGCCGGTCAGCAGCACGGAGGTCGGCAGCGGCGCGACCCGCGCGATCGTCTCGCGCACCCCGGCGATGGCGGCCGATTCCCCGATCAGCCGGTCGCGCAGGAGGATATGGTCGGACGTCGTCTTCAGTTCGTAG
PROTEIN sequence
Length: 156
VAKTKRRSTGTSRSEPTGRTLRSSSTRSSLLCVAGGISLISSRNSVPPCACRNRPSRARSAPVKAPFRWPNSSLSIMSGGIAPQLTGTKGFSARSESACSERAATSLPVPDWPVSSTEVGSGATRAIVSRTPAMAADSPISRSRRRIWSDVVFSS*