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SCNpilot_expt_1000_bf_scaffold_5073_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 14993..15913

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000370C08B similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 295.0
  • Bit_score: 230
  • Evalue 1.80e-57
LysR family transcriptional regulator {ECO:0000313|EMBL:EHK55471.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.2
  • Coverage: 301.0
  • Bit_score: 221
  • Evalue 1.50e-54
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 295.0
  • Bit_score: 217
  • Evalue 8.30e-54

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGCGTCGCTTCATCCCCTCGGGGAACCTGCTCTATGTGTTCGACGCCGCCGCGCGGCTCGAGAGCTTCACGAAGGCCTCCGAGGAACTGAACGTCACGCCGGCGGCGATCAGCCATGCGATACGCCAGCTCGAGACCGGGCTCGGCGCCTCGCTGTTCCACCGCAAGCACCGGCAGTTGCAGCTCACCGACGACGGGGAAAAGCTCTACCGCTCGGTGGAAGGCGGGCTGGACCAGATCGAGCGCACCGCGGTGGAGATCCATTCGACGGCGGCCTCCGACATCAAGGTCTACGCCTCGATCACCGTCGGCACCTACTGGCTCCTGCCGCGCATCTCCACCTATCCGGGCAACGATGCGCGCATCGAGATGCAGCTCTACAATTCCGACAAGAAGCTCGAACTGCCGGCCGACGGCGTCTCCATGGCGATCACCAACGGGCGGGTGGACTGGCCGGGCTACGAGGTCCTGCCCTTCACGCGCGAGACGATGTTCCCGGTATGCAGCCCCGCCTATCTGGAAAAGCACGGGCCGGTATCATCGCTCGACGCGCTGCCCGCACACAATCTCCTCCACCTCGACAGCCACTATCACGAGGGCGCGACGTGGCGGGAGTTCCTGGCGCATTACGGCGTGGACTATGCCGTGCCGGGGGGCGTCTCGACATTCAACAACTATATCCTCGTCGTTCACGCTGTCCTGTCCGGCGCGGGGATCGGCCTCGGCTGGCAGCATTCCGTCGGCGACCTGGTCACCGCCGGCGCCCTGGTCCGCCCGCTGGACGAAACCCAGACGACCAGCAACGATTTCCTGCTGGTTTACAGAAAAGGGCGCCCTCTGACCCCGAGAGCCGCCGCCGTACGCGACTGGCTCCTGAGCCTTGGTTCGCTTGAACCATTGCATCGTGATTTGAAGGACTGA
PROTEIN sequence
Length: 307
MRRFIPSGNLLYVFDAAARLESFTKASEELNVTPAAISHAIRQLETGLGASLFHRKHRQLQLTDDGEKLYRSVEGGLDQIERTAVEIHSTAASDIKVYASITVGTYWLLPRISTYPGNDARIEMQLYNSDKKLELPADGVSMAITNGRVDWPGYEVLPFTRETMFPVCSPAYLEKHGPVSSLDALPAHNLLHLDSHYHEGATWREFLAHYGVDYAVPGGVSTFNNYILVVHAVLSGAGIGLGWQHSVGDLVTAGALVRPLDETQTTSNDFLLVYRKGRPLTPRAAAVRDWLLSLGSLEPLHRDLKD*