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SCNpilot_expt_1000_bf_scaffold_5073_curated_18

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(17382..18341)

Top 3 Functional Annotations

Value Algorithm Source
Ornithine cyclodeaminase {ECO:0000313|EMBL:KFG70557.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 309.0
  • Bit_score: 332
  • Evalue 6.30e-88
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I2M3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 309.0
  • Bit_score: 324
  • Evalue 9.40e-86
  • rbh
ornithine cyclodeaminase/mu-crystallin similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 309.0
  • Bit_score: 287
  • Evalue 4.00e-75

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Taxonomy

Microvirga aerilata → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGCGCCTAGTCGACGGTCACGACGTTCATCGCCTTCTCGATTATCCGTCGCTCGTCGCGGCGCTTCGCAAGGCCCATCGCGGCGCCATGCCCGATGCCGGCGAGCTCTATATGGGCGAACCCGGCGCGCCGGACGGCGGCCGCGGGCTCATCATGCTGCCGGCCTGGAGCCGCGGGGAGATGCTGGGGGCCAAGCTCGTCAGCATCTTCCCCGGCAATCCCCAGGCGACGCCGCCGCATCCCGCCAACCAGGGCCTCTATGTCGCCTTCGACGGCGTGACCGGCGCGCCGGCCCTGGTCGCCGACGGAACCGCGCTGACGCTGCGCAAGACCGCCGCCGATTCCGCCCTCGGGGTGGACCTCCTCGCAAGGCCGGATGCCGCCACGCTGCTCGTCTTCGGCGCGGGCGCGCTCGTTCCCCATGTCGTCGAAGCCATCGTCAGCGTGCGCCCGGCCATACGGCACGTCTGGATCTGGAACCGCACCGCCGACAAGGCCCGGCAGGTCGCGGCCGGCATGCGCATGGACGGCGTGCGGATAGAGGCGGTGGACGATCCCGATGCCGTCCTGCCGCTGGCCGACATCGTCTCGAGCGCTACCATGGCGACGACGCCGCTCGTCAAGGGCGCGCTCCTGAAGGAGGGCTGCCATGTCGACCTCATCGGCGGCTGGCGGCCCGACATGCGCGAATCCGACGACGACGTCATTCGCCGCGCCACGCTCTTTGCCGATACGCGCGATCTCTGCCGCGATTGCGGCGACTTCCTCCAGCCGGTCGAAAAGGGCCTGATGACCTGGGCGAGCATCCGGGCGGACCTGTTCGACCTGTGCCGCGACTCGGGCGAGGGGAGGCGGTCCGCCGACGAGATCACGCTGTTCAAGAATGCGGGCGGTGCCCATCTCGACCTCTTCACCGCGCAGGAACTCCTGCGCAGGGTGCGGTCGGAACCCGAATATTGA
PROTEIN sequence
Length: 320
MRLVDGHDVHRLLDYPSLVAALRKAHRGAMPDAGELYMGEPGAPDGGRGLIMLPAWSRGEMLGAKLVSIFPGNPQATPPHPANQGLYVAFDGVTGAPALVADGTALTLRKTAADSALGVDLLARPDAATLLVFGAGALVPHVVEAIVSVRPAIRHVWIWNRTADKARQVAAGMRMDGVRIEAVDDPDAVLPLADIVSSATMATTPLVKGALLKEGCHVDLIGGWRPDMRESDDDVIRRATLFADTRDLCRDCGDFLQPVEKGLMTWASIRADLFDLCRDSGEGRRSADEITLFKNAGGAHLDLFTAQELLRRVRSEPEY*