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SCNpilot_expt_1000_bf_scaffold_5077_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3414..4286)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUQ7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 285.0
  • Bit_score: 504
  • Evalue 6.00e-140
  • rbh
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EYR84225.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 285.0
  • Bit_score: 504
  • Evalue 8.50e-140
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 288.0
  • Bit_score: 423
  • Evalue 7.30e-116
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGAACAGCAGCGAAGCGGCCCTCACGCGCGTGCCCCGCGATTTCGACAGCCTGCGCAGCGTGATCATCGAGCGCAAGGCGACCATGCCGAAGCGGCTGGCGCAGGTGGCGACCTATGCGCTTTCCAACCCGGACGACATGGCCTTCGGCACCGCGGCGAGCATCGCGACGGCGGCCGACGTGCAGCCCTCCACGCTGGTGCGCCTTGCCCACCACCTCGGCTACGAAGGCTTTTCCGACCTTCAGAACGTCTTTCGCGCGCGGCTGCGCGACCGCACGCTTTCCTACGAGGAGCGCATGCTCTCGCTGGAGGCGGGGCCGGCGGCCAACAGCGACGCGGAACTGCTCTCCGGCTTCCTGACGGCGGCGAGCCAGTCGGTGGCGCGGCTTGCCGGCACTATCGACGGGGAGACCTTCTCCAAGGCCGTCGACCTGCTCGCCCGGGCGGAAACCATCTATCTCGTCGCCAAGCGGCGCTCCTATCCGCTGACGGCGCATATCGCCTATGCCTTCGGCAAGCTCGGCATCCGCCATCAGATCATCGCCTCGCCGAACGGCATCGACCCCGAAATGACGCAGTTCGCGACGACCCGGGACGCCGTGATCGCCGCGAGCTTCGCGCCCTATGCCGCCGAGAGCCTGACGCAGGCGCAGGAGCTCGCCGCCCGGGGTGTGCCCATCGTCGCCATCACCGATTCCGTCTTCTCCCCCCTCGCCGCCTCCGCCACCCACTGGTTCGAGGTGTCGGAGGCTGACTATGCCGGCTTCCGCTCGCTTTCCGCCTCCATCGCGCTCGCCATGGCGCTGCCGGTCGCCATCGCCGAGCGGCGGCGCAGCCTCAAGCGTTCGCCCAAAGGGAATGCTGTGGAATAG
PROTEIN sequence
Length: 291
MNSSEAALTRVPRDFDSLRSVIIERKATMPKRLAQVATYALSNPDDMAFGTAASIATAADVQPSTLVRLAHHLGYEGFSDLQNVFRARLRDRTLSYEERMLSLEAGPAANSDAELLSGFLTAASQSVARLAGTIDGETFSKAVDLLARAETIYLVAKRRSYPLTAHIAYAFGKLGIRHQIIASPNGIDPEMTQFATTRDAVIAASFAPYAAESLTQAQELAARGVPIVAITDSVFSPLAASATHWFEVSEADYAGFRSLSASIALAMALPVAIAERRRSLKRSPKGNAVE*