ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5077_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5618..6073)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F50B77 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 149.0
  • Bit_score: 260
  • Evalue 1.00e-66
AraC family transcriptional regulator {ECO:0000313|EMBL:KFL25961.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 149.0
  • Bit_score: 252
  • Evalue 3.00e-64
glxA; AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 150.0
  • Bit_score: 249
  • Evalue 5.70e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. 17-2-E-8 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGGCGCTGGCCATGATTGCCAGGGATCTCGACGCGGCCATTGCCGGAGAGGTCGCCAAGAGGCTGATCCTTTATGCGCGTCGCCCCGGCTACCAGTCGCAGTTCAGCCCGGTCCTGCAGGCACAGGTCAGGGGCGAGAGCCCCTTTGCCGACCTGATCGGCTGGATCGAGGCCAATCTCGACGCGCCGCTCGACGTGCCGTCCCTCGCCAGCCGCGCCGGGCTCAGCGAGCGCACATTCCATCGCAGGTTCGTGGCGGCGACCGGGCAGACGCCGGCCCGTTTTGTCGAAACGGCCAGGCTCGATGCCGCGCGGATGCTGCTTTCGCGCGGTCTTTCGCTCAAATCGGTCGCCGCACAGGTCGGCCTGTTTCCGGCAACGCGCCTTTCGGATGCTTTCGAACGGCGGTTCGGCGTTGCGCCGAGATTGTTTCGCGACATGCATGCCGGGATGTAA
PROTEIN sequence
Length: 152
MALAMIARDLDAAIAGEVAKRLILYARRPGYQSQFSPVLQAQVRGESPFADLIGWIEANLDAPLDVPSLASRAGLSERTFHRRFVAATGQTPARFVETARLDAARMLLSRGLSLKSVAAQVGLFPATRLSDAFERRFGVAPRLFRDMHAGM*