ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_1000_bf_scaffold_5077_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7084..7803

Top 3 Functional Annotations

Value Algorithm Source
ThiJ/PfpI similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 237.0
  • Bit_score: 351
  • Evalue 2.90e-94
  • rbh
ThiJ/PfpI n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11E59_MESSB similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 237.0
  • Bit_score: 351
  • Evalue 9.20e-94
  • rbh
ThiJ/PfpI {ECO:0000313|EMBL:ABG64316.1}; Flags: Precursor;; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 237.0
  • Bit_score: 351
  • Evalue 1.30e-93

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chelativorans sp. BNC1 → Chelativorans → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGCTCGCCTGGCTGCGGGATCAGTCGCGCAAGGGCGCGCGGATCATCGGCATCTGCGCCGGCGCGAAGGTGCTCGGCGCGGCCGGCCTGATCGATGGACGGCGGGCCACGACCCACTGGTATTATCGGGACGAGATGCTCGAACGCAGTCCGGGCATCGACTATGTCGCGGACCGGCGCATGGTGGCGGACGGAAACGTCGTGACCACCACGGGCATCTCCGCCTCCATGCCGATGATGCTGGCGCTGATCGAGGCGGTTGCAGGGCGCGCGAAAGCGCAGGCCATTGCCGACGATCTCGGCGTCGAAACATGGGATATGCGCCATGCGAGCGCCGCCTTTTCGCTGACGCGGCCCTTTGTGACGACGGTGCTCGCCAATCGCCTGGCCTTCTGGAATCGCGATGCGCGGGGCATCGAGCTTCGGCCCGGCATGGATGAAGTGTCGCTCGCCCTGGTCGCCGATGCCTGGTCGCGGACCTACCGCTCCAGCGCCCTCACATTCGCGGAAACGGCCGGGACGGTCGAGACGCGCAACGGTATCCGCGTCATCCCCGATCGGGTCGCGATGGATTGGCCGCCGGAAGATCGCGCTTCGCTCTATCCCGGTCAGCGGCCGGCCGACGCCCTGGACGATAACCTTCAGGCTATCGCCGACACATACGGCGCGCGCACGATGCATGTCGTCGCCATGCAGCTCGAATATCCGCGCCGGGACTGA
PROTEIN sequence
Length: 240
VLAWLRDQSRKGARIIGICAGAKVLGAAGLIDGRRATTHWYYRDEMLERSPGIDYVADRRMVADGNVVTTTGISASMPMMLALIEAVAGRAKAQAIADDLGVETWDMRHASAAFSLTRPFVTTVLANRLAFWNRDARGIELRPGMDEVSLALVADAWSRTYRSSALTFAETAGTVETRNGIRVIPDRVAMDWPPEDRASLYPGQRPADALDDNLQAIADTYGARTMHVVAMQLEYPRRD*