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SCNpilot_expt_1000_bf_scaffold_5077_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(10377..11387)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein {ECO:0000313|EMBL:KJF71253.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 341.0
  • Bit_score: 413
  • Evalue 2.30e-112
Outer membrane protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UBB2_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 347.0
  • Bit_score: 410
  • Evalue 1.40e-111
  • rbh
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 355.0
  • Bit_score: 406
  • Evalue 8.10e-111
  • rbh

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Taxonomy

Agrobacterium arsenijevicii → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGAACATCAAGAGCCTTCTCATCGGCTCCGCTGCGGCTCTCGCAGCAGTTTCCGGCGCACAGGCCGCCGACGCCATCGTCGCTGCCGAACCGGAACCCATGGAATACGTTCGCGTCTGCGACGCCTTCGGCACCGGCTTCTTCTACATCCCCGGCACCGAAACCTGCCTCAAGATCGGCGGCTATGTCCGTTTCCAGACCGACTTCGGTCGTGACCAGCTCGGCACGTCCGACTGGGATTCCTGGACCCGCGCGCGCGTAACCTTCGATGCGAAGTCCGACACGGAACTTGGCACGCTGACGAGTTTCATCGCCATTCACGGCGAGGCCAGCAAGAAAGAAAGCGGCGGCGGCACGAGCGGCTTCAAGGTCGATGAAGCCTATATCGAACTCGGCGGCTTCCGCGTCGGTACCTTCCTGAACTGGTGGGATGACGATCTGATCGGCGAAACCGACGTGTCTTCCAACGTCACCCGTTTCACCTCGGCTCGCTACGTCTATGACGGCGGCACGTTCCGCGCCGGTATCAGTGTCGACGAAATCAACACGGACGACTACCTTGTCGCGCTCCCCAGCTCGGGTAACGAAGTTGGTGTCTCGGGCATGATCGGCACGACGCTCGGCGGCGTGAACTTCGAACTGCTCGGCGCATACGACACCTATACCGAAGAAGGTGCGCTTCGCGCCTGGCTCTCGGCCGACGTCGGTCCCGGCACGTTCGAACTGATGGGCTACTACGCAAGCGGCGACAACGTCTACTTCAACGCCGCCAAGTGGAGCGTTGCTGCCGACTACTCGTTCAAGGCGACCGACAAGCTGACGATCACCCCCGGCGCCCAGTACTTCGGTGACTACGAACTCGTGAAGGGCATCGACGCGTGGAAGGCCGGCCTGACGGTCGACTACACGATCGTCGAGAACCTCAAGCTCAAGGCAACCGTCAACTACATCGACGTCGACAAGCAAGACGACGCGGTCGAAGGCTTCCTTCGCCTGCAGCGTTCGTTCTAA
PROTEIN sequence
Length: 337
MNIKSLLIGSAAALAAVSGAQAADAIVAAEPEPMEYVRVCDAFGTGFFYIPGTETCLKIGGYVRFQTDFGRDQLGTSDWDSWTRARVTFDAKSDTELGTLTSFIAIHGEASKKESGGGTSGFKVDEAYIELGGFRVGTFLNWWDDDLIGETDVSSNVTRFTSARYVYDGGTFRAGISVDEINTDDYLVALPSSGNEVGVSGMIGTTLGGVNFELLGAYDTYTEEGALRAWLSADVGPGTFELMGYYASGDNVYFNAAKWSVAADYSFKATDKLTITPGAQYFGDYELVKGIDAWKAGLTVDYTIVENLKLKATVNYIDVDKQDDAVEGFLRLQRSF*