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SCNpilot_expt_1000_bf_scaffold_7033_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..474

Top 3 Functional Annotations

Value Algorithm Source
TIGR02300 family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEP1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 243
  • Evalue 1.00e-61
TIGR02300 family protein {ECO:0000313|EMBL:EYR84131.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 129.0
  • Bit_score: 243
  • Evalue 1.50e-61
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 128.0
  • Bit_score: 218
  • Evalue 1.90e-54

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
AGGGGACCGGCTAATCATTTTCCCCTTCAACGCGCCGGAACCCCGGCCACGCCGGAAACGAACGGCACCTTAGAGGCTTTGACAGTGGCAAAACCGGAACTCGGAACCAAACGCATCGATCCGGAAACGGGCAAGAAGTTCTACGACCTGAACCGCGACCCGATCGTTTCTCCCTATACGGGCAAGTCCTACCCGCTCTCCTTCTTCGAGGAGACTTCCGCGGCCGCCGTCCTGGAAAAGGATGAGGACGAGGACGTCAGCGAAGTCGATACGGAGAACACGGAAGTCGAACTCGTCTCGCTCGAGGATGCCGACGAGGATGCATCCGGCGGCGACGACCTGCCGGATCTCGGCGACGACGACGTCGAGATCGACGGCGACGACGACGACACGTTCCTGGAACAGGACGAAGACGACGACGATGACGACATGACCGGCCTCATCGGCGTCACGGGTGACGAAGACGAAGCTTAA
PROTEIN sequence
Length: 158
RGPANHFPLQRAGTPATPETNGTLEALTVAKPELGTKRIDPETGKKFYDLNRDPIVSPYTGKSYPLSFFEETSAAAVLEKDEDEDVSEVDTENTEVELVSLEDADEDASGGDDLPDLGDDDVEIDGDDDDTFLEQDEDDDDDDMTGLIGVTGDEDEA*