name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_7033_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1..474
|
TIGR02300 family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEP1_9RHIZ
TIGR02300 family protein {ECO:0000313|EMBL:EYR84131.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_trna_1
unknown
|
Not on your lists |
622..694
|
transferRNA
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_2
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
936..1163
|
hypothetical protein
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7P1_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:BAJ83108.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_3
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1197..1475
|
Transcriptional regulator, XRE family {ECO:0000313|EMBL:CDN49374.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Xre family transcriptional regulator
Xre family transcriptional regulator n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J7P2_ACIMA
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1774..2043)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CV95_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84132.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2194..2985
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EWK9_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR84134.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transmembrane protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2989..3462)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZJ2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84135.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3653..4288
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D487_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR84136.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transmembrane protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4298..4717)
|
Transcriptional regulator Fur family protein {ECO:0000313|EMBL:EYR84137.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Fur family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00037D02BA
fur5; putative ferric uptake regulator, FUR family; K09826 Fur family transcriptional regulator, iron response regulator
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_9
unknown
|
Not on your lists |
comp(5241..5417)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5585..6808
|
3-oxoacyl-[acyl-carrier-protein] synthase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7B3_9RHIZ
rbh
3-oxoacyl-[acyl-carrier-protein] synthase 1 {ECO:0000313|EMBL:EYR84139.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EYR84139.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6814..7620
|
Enoyl-[acyl-carrier-protein] reductase 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2W6_9RHIZ
rbh
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7669..7896)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EYX1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84141.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7997..9013)
|
Ribosomal RNA small subunit methyltransferase C n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7A9_9RHIZ
rbh
Ribosomal RNA small subunit methyltransferase C {ECO:0000313|EMBL:EYR84144.1}; EC=2.1.1.172 {ECO:0000313|EMBL:EYR84144.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_7033_curated_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9107..10147)
|
Polyribonucleotide nucleotidyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2W2_9RHIZ
rbh
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
pnpA; polynucleotide phosphorylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
rbh
|