ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7033_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5585..6808

Top 3 Functional Annotations

Value Algorithm Source
3-oxoacyl-[acyl-carrier-protein] synthase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7B3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 407.0
  • Bit_score: 789
  • Evalue 1.30e-225
  • rbh
3-oxoacyl-[acyl-carrier-protein] synthase 1 {ECO:0000313|EMBL:EYR84139.1}; EC=2.3.1.41 {ECO:0000313|EMBL:EYR84139.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 407.0
  • Bit_score: 789
  • Evalue 1.80e-225
fabB; 3-oxoacyl-ACP synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 407.0
  • Bit_score: 756
  • Evalue 5.10e-216
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
ATGAGACGGGTAGTTGTCACGGGTCTGGGGGTCGTATCCTCCATCGGGAACAATGCGGACGAAGTGACGGCATCGCTGCGCGACGCGCGCTCCGGCATCAGCTTCTCGCAGGATTTCGCCGACCACGGCTTCAAGTGCCAGGTCTGGGGTTCGCCGAACATCGACACGACCGACCTCGTCGACCGCCGCGCGGCCCGCTTCCTCTCGCAGGGCGGTGCGTGGAACCACGTCGCGATGAAGCAGGCGATCGCCGATTCGGGCCTCGAAGAATCCGACTACTCGGCCAACCCGCGCGCCGGCATCATCATGGGGTCAGGCGGACCTTCCACCCGCACGCTGATCGAGGCGGCCGAGATCACCATCAAGAACAACTCGCCCAAGCGCATCGGCCCCTTCGCCGTGCCGAAGGCGATGTCGTCGACGGCCTCGGCGACGCTCGCCACCTGGTTCAAGATCCACGGCGTCAACTATTCCATCTCGTCGGCCTGCTCGACCTCGGCGCACTGCATCGGCAATGCCGCGGAAATGATCCAGTGGGGCAAGCAGGACATCATGTTCGCCGGCGGCCACGAGGACCTCGACTGGACCATGTCGAACCTCTTCGACGCCATGGGCGCCATGTCCTCCAAGTACAACGACACGCCGGCGACGGCCTCGCGCGCCTATGACATCAGCCGCGACGGCTTCGTCATCGCCGGCGGCGCGGGCGTCCTCGTCCTTGAGGAACTGGAGCACGCCAAGGCGCGCGGCGCGAAGATCTACGCGGAAATCGTCGGCTACGGCGCGACCTCGGACGGCTACGACATGGTGGCTCCTTCGGGCGAAGGCGCGGTGCGCTGCATGCGTCAGGCGCTCGCCACCGTGAACGGCGATGTCGACTACATCAACACGCACGGCACCTCGACGCCCGTCGGCGATTCGAAGGAGATCGGTGCGATCCGCGAGGTCTTCGGCGACAAGATCCCGCACATCCAGTCGACCAAGTCGCTGACCGGCCATTCGCTCGGCGCGGCGGGGGTGCAGGAATCGATCTACGGCCTGCTGATGATGCAGGCCGGCTTCATCGGCGAAAGCGCGCACATCACCGAACTGGACCCGGAATTCGAAGGCGTTCCGATCGTGCGCAAGCGCATCGACAATGCCAAGATCGACACGGTTCTCTCCAATTCCTTCGGCTTCGGCGGCACGAACGCCACGCTGGTCTTCCAGCGCCACAACGGATGA
PROTEIN sequence
Length: 408
MRRVVVTGLGVVSSIGNNADEVTASLRDARSGISFSQDFADHGFKCQVWGSPNIDTTDLVDRRAARFLSQGGAWNHVAMKQAIADSGLEESDYSANPRAGIIMGSGGPSTRTLIEAAEITIKNNSPKRIGPFAVPKAMSSTASATLATWFKIHGVNYSISSACSTSAHCIGNAAEMIQWGKQDIMFAGGHEDLDWTMSNLFDAMGAMSSKYNDTPATASRAYDISRDGFVIAGGAGVLVLEELEHAKARGAKIYAEIVGYGATSDGYDMVAPSGEGAVRCMRQALATVNGDVDYINTHGTSTPVGDSKEIGAIREVFGDKIPHIQSTKSLTGHSLGAAGVQESIYGLLMMQAGFIGESAHITELDPEFEGVPIVRKRIDNAKIDTVLSNSFGFGGTNATLVFQRHNG*