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SCNpilot_expt_1000_bf_scaffold_7033_curated_14

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(9107..10147)

Top 3 Functional Annotations

Value Algorithm Source
Polyribonucleotide nucleotidyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2W2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 346.0
  • Bit_score: 665
  • Evalue 3.20e-188
  • rbh
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 346.0
  • Bit_score: 665
  • Evalue 4.50e-188
pnpA; polynucleotide phosphorylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 345.0
  • Bit_score: 653
  • Evalue 3.00e-185
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
AGCCTGACCGGCATGTACAAGGAACGCTTCCTGCTGCACTACAACTTCCCGCCCTATTCGGTCGGTGAAACGGGCCGCATGGGCTCCCCGGGCCGCCGTGAGATCGGCCACGGCAAGCTCGCATGGCGCGCCATCCGTCCGATGCTGCCGACGGCGGAACAGTTCCCCTATACGCTGCGCGTCGTTTCCGAGATCACCGAGTCGAACGGCTCGTCCTCGATGGCCACCGTCTGCGGCACCTCGCTCGCCCTCATGGACGCCGGCGTTCCGCTGGCAAAGCCGGTTGCCGGTATCGCCATGGGCCTCATCCTCGAAGGCGACCGCTTCGCGGTTCTCTCCGACATCCTCGGCGACGAAGACCACCTCGGCGACATGGACTTCAAGGTCGCCGGCACGGCCGACGGCATCACCTCGCTGCAGATGGACATCAAGATCGCCGGCATCACCGAGGAGATCATGAAGGTTGCTCTCGGCCAGGCACAGGGCGGCCGCGAGCACATCCTCGGCGAGATGGCCAACGCCATCACCGAAAGCCGCGGCCAGCTCGGCGAGTTCGCCCCGCGCATCGAAGTCATGAACATCCCGGTCGACAAGATCCGTGAAGTCATCGGCACGGGCGGCAAGGTCATCCGCGAGATCGTCGAGAAGACCGGCGCCAAGATCAACATCGAAGACGACGGCACGATCAAGATCGCGTCCTCGTCCGGAAAGGAGATCGAAGCGGCCCGCAAGTGGATCCACTCCATCGTCGCGGAACCGGAAGTCGGCCAGGTCTATGAAGGCACGGTCGTCAAGACCGCCGACTTCGGCGCCTTCGTCAACTTCTTCGGCCCGCGCGACGGCCTCGTGCACATCTCGCAGCTCGCCCAGGAGCGCGTTGCCAAGACCTCCGACGTCGTCAAGGAAGGCGACAAGGTCTGGGTCAAGCTGATGGGCTTCGACGAGCGCGGCAAGGTCCGCCTCTCCATGAAGGTCGTCGACCAGGCGACCGGCAAGGAAATCTCCGCCGAGAAGAAGGGTGACGGCGAAGCCGCCGAGTAA
PROTEIN sequence
Length: 347
SLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPTAEQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFAVLSDILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALGQAQGGREHILGEMANAITESRGQLGEFAPRIEVMNIPVDKIREVIGTGGKVIREIVEKTGAKINIEDDGTIKIASSSGKEIEAARKWIHSIVAEPEVGQVYEGTVVKTADFGAFVNFFGPRDGLVHISQLAQERVAKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKEISAEKKGDGEAAE*