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SCNpilot_expt_1000_bf_scaffold_7033_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4298..4717)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator Fur family protein {ECO:0000313|EMBL:EYR84137.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 139.0
  • Bit_score: 272
  • Evalue 2.60e-70
Fur family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00037D02BA similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 139.0
  • Bit_score: 245
  • Evalue 2.40e-62
fur5; putative ferric uptake regulator, FUR family; K09826 Fur family transcriptional regulator, iron response regulator similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 137.0
  • Bit_score: 241
  • Evalue 1.40e-61

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGACGCATGCACATGAATTGCCCATCGAGGAGCGCCTGCGCCACTCCGGCCTGCGCCCGACGCGCCAGCGTGTGGCCCTTGCCGACCTGCTGTTCGCCAAGGGCGACCGGCATCTGACGGTGGAGGAACTGCACGAGGAAGCCGTCACCGCCGGCGTCCCGGTCTCGCTTGCAACCGTCTACAACACGCTGCACCAGTTCACGGAGGCCGGCCTCATCCGGGTTCTGGCCGTCGAAAGCTCGAAGACCTATTTCGACACCAACGTGTCGGATCATCACCATTTCTTCGTGGAGGGCGAGAACCACGTCCTCGACATTCCCGTGAGCAACATCGCCATCGGCAACCTGCCGGAACCGCCCGAAGGCATGGAGATCGCGCATGTCGACGTGATCATCCGCCTGCGCCCGCGCCGCGGCTGA
PROTEIN sequence
Length: 140
MTHAHELPIEERLRHSGLRPTRQRVALADLLFAKGDRHLTVEELHEEAVTAGVPVSLATVYNTLHQFTEAGLIRVLAVESSKTYFDTNVSDHHHFFVEGENHVLDIPVSNIAIGNLPEPPEGMEIAHVDVIIRLRPRRG*